Gene Bamb_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3649 
Symbol 
ID4312545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp495193 
End bp497085 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content69% 
IMG OID638151491 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_775537 
Protein GI115358399 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00810793 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA AAAAGAAGAC CCACCCCGCC GATCCGTACG CCGCCGCGAC CAAGCATCCG 
ATGCTCGCGT CGCGCCTGCC GATGTGGCGC TCGAAACTGG TCGTGATCAT GGTGTCCCTC
GGATTCGCCG CGCTGATCGG ACGCGCGTTC TGGGTGCAGG TCGCGAACCA GGATTTCTAT
GTCGGGCAAG GCCAGAAGCG CTACCAGCGC ACGATCGAGC TCGACGCGAT GCGCGGCCGC
ATCGTCGATC GCAACGGCGC GATGCTCGCG GTCAGCCTGT CGACCTATGA AATCTGGGCG
AACCCGAAAC AGGTCGCCGA AATCGACTAT CCGCAGCTCG CGAAGCTGCT CGACATGCCG
CTCGCGGAAA TAAAACGCCG CCTGCGCAAC GACCGTACGT TCGTGCTGCT GAAGCGGCAG
GTCGACGCCG ATACCGCGGG CCGGCTCGAC AAGCTCGCGA TCGACGGCAT CACGCAGATC
GCCGATTCGA AGCGCTTCTA TCCGGAAGGC GAGTCGGCCG CGCACGTGGT CGGCTTCACC
AACGTCGAGG ACAAGGGCCA GGAAGGCGTC GAACTCGCGG CGAATGCGCG GCTGTCGGGG
ACGTCCGGAC AGCGCGAGGT GATCCGCGAC CGGCTCGGGC GCATCGTGTC CGACACGCGC
CCGCTCGTGC CCGCGCAGCA CGGCGCGACG ATCGAACTGA CGATCGACCG GCGCATCCAG
CAGCTCGCGT TCAGCCAGCT CAAGGCCGCG GTGCTCGAGA ACAATGCGGT GGCCGGCAGC
GTCGTCGTGC TCGACGCGCA GAACGGCGAA ATCCTCGCGC TCTCGAACTA CCCGACCTTC
GATCCGAACG ATCGCTTCCG GCTGACCGGC CAGCAGTTGC GCAACCGCGC GGTGATCGAC
ACGTTCGAGC CCGGCTCGAC GATCAAGCCG CTCGTCGTCG CGCTGTCGAT CGACGAGCGC
AAGGTCACGC CGAACACGAT CATCAACACG TCGCCGGGCA CCTACAAGAT CGGCCCGGCC
GTGATCCACG ACACGTCGAA CCACGGCTCG CTGACCGTGT CGGAGGCGCT GCAGAAGTCG
AGCAACGTCG CGCTCGCCAA GCTGGCGCTG AACCTGCCCG CTGAAACGAT CTGGAACAAG
TATCAGGAAT ACGGGATCGG CCGCGCGCCG GAGCTGACGT TCCCGGGCGT CGCGTCGGGC
CGCCTGCGCG GCTACAAGCG CTGGCGGCCG ATCGAGCAGG CGACGATGGC GTACGGCTAC
GGGCTGTCGA TGTCGCTGCT GCAGATCGCG CAGACCTACA CCGCCTATGC GGGCGACGGC
ACGCTGCACC CGGTGTCGCT GCTGAAGAGC GGCACCGACC CGCTGACGAT GGATTCCCGT
CGCGGGCACC GCGTGACGTC GCCGCAAACC GCGGCGGCGA TCCGCGCGAT GCTCGAGTCG
GCGGTCGGCG AAGGCGGCAC GGGGCGCCGC GCACGGGTCG ACGGCTACCG GATCGGCGGC
AAGACGGGCA CGGCGCGCAA GCAGGTCGGC GCGACCTATG CGAAGGGCAA GTACCGCGCA
CTGTTCGCGG GGATGGCGCC GATGAGCAAC CCGCGCCTGA TCGTCGCGGT GATGATCGAC
GAGCCGCGCG GCAAGGGCTA CTACGGCGGC ACGGTGGCCG GCCCGGTGTT CTCGTCGGTC
ACGAGCGGCG CGCTGCAGTT GCTCGGCGTG CCGCCCGATG CACCGGTCGA GCCGACGCCG
AACGCGCCGG CCAGGGGCGC GGCCCCGCAG AAGCCGGGCG CGGCACCGAA GGCTGCGGCG
CAGCCGAAGA CGGCGGCCGC GCAGAAGGCG GCGACGTCGG TGAAGACGGC CGCGCAATCC
GGCGCGACCG TACAGGCGAA GGCGGCGGGC TGA
 
Protein sequence
MSVKKKTHPA DPYAAATKHP MLASRLPMWR SKLVVIMVSL GFAALIGRAF WVQVANQDFY 
VGQGQKRYQR TIELDAMRGR IVDRNGAMLA VSLSTYEIWA NPKQVAEIDY PQLAKLLDMP
LAEIKRRLRN DRTFVLLKRQ VDADTAGRLD KLAIDGITQI ADSKRFYPEG ESAAHVVGFT
NVEDKGQEGV ELAANARLSG TSGQREVIRD RLGRIVSDTR PLVPAQHGAT IELTIDRRIQ
QLAFSQLKAA VLENNAVAGS VVVLDAQNGE ILALSNYPTF DPNDRFRLTG QQLRNRAVID
TFEPGSTIKP LVVALSIDER KVTPNTIINT SPGTYKIGPA VIHDTSNHGS LTVSEALQKS
SNVALAKLAL NLPAETIWNK YQEYGIGRAP ELTFPGVASG RLRGYKRWRP IEQATMAYGY
GLSMSLLQIA QTYTAYAGDG TLHPVSLLKS GTDPLTMDSR RGHRVTSPQT AAAIRAMLES
AVGEGGTGRR ARVDGYRIGG KTGTARKQVG ATYAKGKYRA LFAGMAPMSN PRLIVAVMID
EPRGKGYYGG TVAGPVFSSV TSGALQLLGV PPDAPVEPTP NAPARGAAPQ KPGAAPKAAA
QPKTAAAQKA ATSVKTAAQS GATVQAKAAG