| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3604 |
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| Symbol | |
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| ID | 4312500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 436918 |
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| End bp | 438540 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151446 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_775492 |
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| Protein GI | 115358354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGC ATGACATGAA GAACGTCCCG GCCACCGCCG CGGCGCACGC GAGCCGGCCG
GCCGTCGTGA TCGGCGACCG GCATCTGACG ATCGAGGACG TCGTCGCGAT CGCCCGCGAT
GGTGCGCCTG TCGCGCTGAA TGCGGCGAGC GCGTGGCGCT CGCGGATCGA GCGCGGCGCA
ACCTGGCTGC GCGACTATCT CGCGAACGGC GGCACGCTGT ACGGTGTCAC GACCGGATAT
GGCGACGCGT GCGTGGTCGA GGTGCCGCCG TCGCTCGTCG AAGCGCTGCC GCTGCAACTG
ACCCGTTATC ACGGATGCGG GATGGGCGAC TGGTTCGACG CGACGCAGAC GTTGTCCATC
ATCGTCGCGC GGCTCAATTC GCTCGCGTTC GGTTACTCGG GCGTGCGGTT CACGTTGCTG
GAGCGGCTGG CCGATCTGGT GAATCACCGC ATCCTGCCGC GCATTCCATC GGAAGGCTCG
GTCGGCGCGA GCGGCGACCT GACACCGCTG TCCTACGTCG CCGCGGCGCT GGTCGGCGAG
CGCACCGTAT CGTTCGCCGG CGACGAGCGC GACGCGCGGG ACGTATGGCG CGCGATCGAT
CGCGCGCCGC TCACGCTTGC GCCGAAGGAA GGGCTGGCGC TGATGAACGG CACGGCGGTC
ATGACGGGGC TGGCCTGCCT CGCGTTTGCG CGTGCCGAGC ACCTGACGTC GATGGCTGCC
CGCCTGACGG CGTTGACGAC GGTCGCGCTC GACGGACGGG CCGGGCACTT CGATGCGCGC
TTGTTCGACG CGAAGCCGCA TGCGGGGCAG GGCGAGGCGG CCGCATGGAT ACGCGCCGAC
CTGGCCGGGC GCGACGAATC GCCGGGCCGG CGCTTGCAGG ATCGCTATTC GGTCCGGTGC
GCGCCGCACG TGATCGGCGT GGCGCGCGAC GCGTTGTCGT GGATGCGTCG CGATATCGAG
AACGAACTGA ACAGCGCGAA CGACAATCCG CTGATCGATC CGGACGAAGG GTGCGTGCTG
CACGGCGGCA ATTTCTACGG CGGCCATATC GCATTCGCGA TGGATGCGCT GAAGACCGCT
GTGGCGAACC TCGCGGATCT GATGGATCGC CAGCTCGCGC TGCTAGTCGA CGACAAGTTC
AGCAACGGAC TGCCGCGCAA CCTGACGGGG GCGACCGGAG AACGTGCCGC GATCAACCAC
GGGTTCAAGG CCGTGCAGAT CTCGTCGTCC GCATGGACGG CGGAGGCGCT GAAGCACACG
ATGCCGGCGA GCGTGTTCTC GCGCTCGACG GAGTCGCACA ACCAGGACAA GGTCAGCATG
GGAACGATCG CCGCACGCGA TTGCCTGCGC GTGCTGGCGC TGACCGAGCA GGTCGCCGCG
GCGCACGTGC TTGCGACCGT GCAGGCCGTC CGTCTGCGGC TGCGCGACGA CCCGCGCACG
CAGCTTTCGC CCGCGCTGCG CGCGTTCATC GACGATGTGG GTCGCCACTC GCCGCTGGTG
GTCGAGGACC GGCCGCTCGA AGCGGAGCTG CGCGCGTTGA CCGCGCGCCT GGCAGCCTGC
GAGCCGATTG GCGAGCCGAT CGGCGGATCG TTCGGCGCAT GCCGGCGCGG GGAGGCGGCA
TGA
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| Protein sequence | MAEHDMKNVP ATAAAHASRP AVVIGDRHLT IEDVVAIARD GAPVALNAAS AWRSRIERGA
TWLRDYLANG GTLYGVTTGY GDACVVEVPP SLVEALPLQL TRYHGCGMGD WFDATQTLSI
IVARLNSLAF GYSGVRFTLL ERLADLVNHR ILPRIPSEGS VGASGDLTPL SYVAAALVGE
RTVSFAGDER DARDVWRAID RAPLTLAPKE GLALMNGTAV MTGLACLAFA RAEHLTSMAA
RLTALTTVAL DGRAGHFDAR LFDAKPHAGQ GEAAAWIRAD LAGRDESPGR RLQDRYSVRC
APHVIGVARD ALSWMRRDIE NELNSANDNP LIDPDEGCVL HGGNFYGGHI AFAMDALKTA
VANLADLMDR QLALLVDDKF SNGLPRNLTG ATGERAAINH GFKAVQISSS AWTAEALKHT
MPASVFSRST ESHNQDKVSM GTIAARDCLR VLALTEQVAA AHVLATVQAV RLRLRDDPRT
QLSPALRAFI DDVGRHSPLV VEDRPLEAEL RALTARLAAC EPIGEPIGGS FGACRRGEAA
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