Gene Bamb_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3539 
Symbol 
ID4312435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp358606 
End bp359286 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID638151381 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_775427 
Protein GI115358289 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GAAAAACCGC CAAACACCCG GAACCGCCGC TGCCACGCAC TTGGGATGCG 
CGGCTCGCGC GCGCGCTCGT CCGGCCGCTG ATCGACACGC CGGTCACCCC GAATCACCTC
ACTACCCTTC GTCTGCTGAT CGGCCTCGCC GGCGCCTGGT GCCTGGCGCA AGGCGGCTTC
GGCTGGAGCA ACGCAGGCGC ATTCCTGATC GTGCTGTCGA ACTTCGTCGA CCACACCGAC
GGCGAACTCG CGCGCATCAG CGGCAAGTCC AGCAAGATCG GTCACTTTTA CGACCTCGCG
GCCGACGCGC TCGTGACGGT CGCGCTGTTC GTCAGCATGG GCGTCGGCAT CGTCGCCCAG
GGCGGCCAGA TGGCCGCGTC GCCGGTGCTG CTCGGTGCGC TGGCCGGCGG TGCCGTCGCG
CTGATCTTCT TCCTGCGCAT GCGGATCGAG TCGGTCGCCG GCAAGGCCGG CACCAAGCAG
GCGTTCGCCG GCGGCTTCGA GACGGAAGAC GTGCTCTACC TGCTGCCGCT CGTGACGCTC
ACCGACAGCG TCCAGCCGTT CCTGCTCGCG GCGTCGATCG GCGCCCCGCT GTTCGCCGCG
TGGGTCGTGA TCGACTGGTG GCGCATCGTG CGCCGCGGCA ACACCCCGCA GAATTCAACC
GAAATCCAGG CTTCCAAATG A
 
Protein sequence
MDQRKTAKHP EPPLPRTWDA RLARALVRPL IDTPVTPNHL TTLRLLIGLA GAWCLAQGGF 
GWSNAGAFLI VLSNFVDHTD GELARISGKS SKIGHFYDLA ADALVTVALF VSMGVGIVAQ
GGQMAASPVL LGALAGGAVA LIFFLRMRIE SVAGKAGTKQ AFAGGFETED VLYLLPLVTL
TDSVQPFLLA ASIGAPLFAA WVVIDWWRIV RRGNTPQNST EIQASK