Gene Bamb_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3538 
Symbol 
ID4312434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp357800 
End bp358609 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID638151380 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_775426 
Protein GI115358288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTA GCACGCGCGA CGACTCCGTG CTGAGCCCGG CACGCCCCGC GCCTGCGCGC 
GCGGCGGCGG CCGATCCCGA TCGCACCGTG GCCGGCTGTG TCGGCCAACT CGACCTCGAC
CGCCTGCGCA GCGACTACAC GCGCCAGGGG TCGTTCCTGT ATCTGGACGC ATTCCTGCCG
CCCGACGCGC ACGCGAAACT CGCGGCCGCG GCCCGCGCGC TGCAGCCCGG CCTGAACCGC
AATTACCTGC CCGGCCACAA GCAGGGCGGC AGCGTGAGCC GGCACACGAT CGACGAAAAG
GCACCGTACA TCGCGGAACT GTACCGCTCG AAGGCGCTGA TCGGCTTCCT CGAGAAGATC
ACGGGCGACA AGCTGATGGT GTCGCCGGAG AACGATCCGC ACGCATACGC GCTGTATTAC
TACACGAAGC CGGGCGACCA CATCGGCTGG CACTACGACA CGTCGTACTA CGACGGCCGC
CGCTATACGC TGCTGATCGG CGTGATCGAC GAATCGTCGT GCCGGCTCGA CTACGAACTG
CATACGCGCA ATCCGGACGT GCCCGACGAA CCGGGTTCCG TGCAGATCGC CGACGGCGGC
ATCGTGCTGT TCGACGGCGA CAAGCTGCGC CACCGGATCA CGCCGCTCGG CCAGAACGAG
ACGCGCGTGT CGCTGACTTT CGAATACGTG ACCAACCCCG GCATGCGGCC GTGGAAGCGC
TTCATCTCGA ACATGAAGGA CGCGATCGCG TATTTCGGTT TCCGCCAGGT GTTCAAGCAG
CTGGCCACGC GACGGTCGAG CGGGTCATGA
 
Protein sequence
MTSSTRDDSV LSPARPAPAR AAAADPDRTV AGCVGQLDLD RLRSDYTRQG SFLYLDAFLP 
PDAHAKLAAA ARALQPGLNR NYLPGHKQGG SVSRHTIDEK APYIAELYRS KALIGFLEKI
TGDKLMVSPE NDPHAYALYY YTKPGDHIGW HYDTSYYDGR RYTLLIGVID ESSCRLDYEL
HTRNPDVPDE PGSVQIADGG IVLFDGDKLR HRITPLGQNE TRVSLTFEYV TNPGMRPWKR
FISNMKDAIA YFGFRQVFKQ LATRRSSGS