| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3534 |
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| Symbol | |
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| ID | 4312430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 353138 |
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| End bp | 354319 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151376 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_775422 |
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| Protein GI | 115358284 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAG CGGCCCAGTT CGTCGAGGCC GCGCGCGAGC GCGGTTTCGA CTGGTACGCG
GGCGTGCCCT GCTCGTACCT GACGCCGTTC ATCAATTACG TGCTGCAGGA CCCGACGCTG
CACTACCTGT CGGCCGCGAA CGAAGGCGAC GCGGTCGCGC TGATCGCTGG CGCCACGCTT
GGCGGCAAGC GCGGGATCGC GATGATGCAG AACTCCGGGC TCGGCAATGC GGTGAGCCCG
CTCACGTCGC TGACCTGGAC GTTCCGGCTG CCGCAGTTGC TGATCGTCAC GTGGCGCGGC
CAGCCGGGCG TGTCCGACGA GCCGCAGCAC GCGCTGATGG GGCCGATTAC GCCCGCCATG
CTCGACACGA TGGAGATCCC GTGGGAGACG TTCCCGACCG ACCCCGAACA GGTCGGCCCG
GCGCTCGACC GCGCGATCGC GCACATGGAC GCAACCGGCC GCCCGTATGC GCTCGTGATG
CAGAAAGGCA GCGTCGCGCC GTATGAACTG AAGGCGAACC CGGCGGCGAC GCCGCGCGCG
CATGTCGCCG CCCAGTCCGC GGCACGTGCT GAATCACCCG CCGCGTGGCC GACCCGCCAC
GACGCGCTGC AACGCGTAAT CGCGCACACG CCGGTCGATT CGACCGTCGT GCTCGCGTCG
ACCGGCTTCT GCGGCCGCGA ACTCTATGCG ATCGACGATC GTCCGAACCA GTTGTACATG
GTCGGCTCGA TGGGTTGCGT GACGCCGCTC GCGCTGGGGC TCGCGCTCGC GCGTCCCGAC
CTGCGCGTGG TGGCCATCGA CGGCGACGGC GCTGCGCTGA TGCGCATGGG CGTGTTCGCG
ACGCTCGGCA CCTACGGGCC GTCCAACCTT ACGCACGTGC TGCTCGACAA CGGCGCGCAC
GAATCGACGG GCGGCCAGGC GACCGTGTCG CAGCATGTGT CGTTCGCGGG TGTCGCGGCC
GCGTGCGGCT ACGCGTCCGC CGTCGAAGGC GACACGCTCG ACGTGCTCGA TGCAACGCTC
GCTGCGCAGA GCAACGGTAC GCAGTTCGTG CGCGTTGCGA TCCGCACGGG CGTGCCCGAC
GGCCTGCCCC GCCCGACCGT CACGCCGGTC GAGGTCAAGA CCCGCCTGAT GCGGCATATC
GGCGCCGCAC AGGCCGAAGC CCACGCCGAA GGAGCTCATT GA
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| Protein sequence | MIEAAQFVEA ARERGFDWYA GVPCSYLTPF INYVLQDPTL HYLSAANEGD AVALIAGATL
GGKRGIAMMQ NSGLGNAVSP LTSLTWTFRL PQLLIVTWRG QPGVSDEPQH ALMGPITPAM
LDTMEIPWET FPTDPEQVGP ALDRAIAHMD ATGRPYALVM QKGSVAPYEL KANPAATPRA
HVAAQSAARA ESPAAWPTRH DALQRVIAHT PVDSTVVLAS TGFCGRELYA IDDRPNQLYM
VGSMGCVTPL ALGLALARPD LRVVAIDGDG AALMRMGVFA TLGTYGPSNL THVLLDNGAH
ESTGGQATVS QHVSFAGVAA ACGYASAVEG DTLDVLDATL AAQSNGTQFV RVAIRTGVPD
GLPRPTVTPV EVKTRLMRHI GAAQAEAHAE GAH
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