| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3427 |
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| Symbol | |
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| ID | 4312162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 222451 |
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| End bp | 223308 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151269 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_775315 |
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| Protein GI | 115358177 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.204482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.406581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAT CCGTCATCCG CGCGCTGGCG TTCGCGGCCG TGCTGCCCGT GCTGGCCGGC
GGCTGCGCGC CGGGCATCCA GACGAGAGCA GCGCTGTCGC ACAAGAGCGA CGACCCGCAG
GCCGAATTGC GCATTGCCGA CAGCGCGCTC TCCGGCGGCA ACGTCGAGCT TGCGTCGACG
CTGTACGGAA AGGTGCTCGC GCGGCATCCA GATTCGCTCG CGGCGCAGCT GGGCCTCGGC
GACGTCAACT ACCGGGCCGG CGATCTGGAG CGCGCGCGAA TTCTCTATGA GCAGGCACGG
CAACAGGCGC CGGCGGATCT CGGGCCGCAG CTGGGGCTCG CGCGCGTCGC GTTGCGCCAG
CGCCGGCTCG ACGAGGCCGC GCAGCGCTAC CGCGACCTGC TGGCCGCGCA GCCGAACCTG
CCGCTCGCGG CGCAAGGGCT CGGCACGGTG CTCGACCTGC AAGGCCGCCA TGCCGACGCG
CAAGCCGTGT ATCGCGACGC GCTCAACGCG CATCCGGACG CGCAGGGGCT GCGCATCGAC
CTCGGGCTGT CGCTCGTGCT GAGCAACCGG CCGCGCGAAG GCGTGAACGT GCTGCTCGAC
GTGGCCGGCT TGCCCGACGC GCCGTGGCAG GCGCGCCAGA ACCTCGCGTT CGCGTACGGC
GTGCTCGGCA ACACGGATTC GGCGAAAAAG CTGTTGTCTG CCGACCTGCC TGCGTCGGCG
GTGGCCGACA ACCTGCGCTT CTACCAGGCG GTGCGCGCGC AGCTCGCGGC GCGCCCGGCG
GCGGCCGCCG CGCGGCCGTT GACGGGCGCG GCGCTCGAGC GGAGCGTCGT GCCTCCCGCT
GCGGGGACCA CAAAATGA
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| Protein sequence | MTRSVIRALA FAAVLPVLAG GCAPGIQTRA ALSHKSDDPQ AELRIADSAL SGGNVELAST
LYGKVLARHP DSLAAQLGLG DVNYRAGDLE RARILYEQAR QQAPADLGPQ LGLARVALRQ
RRLDEAAQRY RDLLAAQPNL PLAAQGLGTV LDLQGRHADA QAVYRDALNA HPDAQGLRID
LGLSLVLSNR PREGVNVLLD VAGLPDAPWQ ARQNLAFAYG VLGNTDSAKK LLSADLPASA
VADNLRFYQA VRAQLAARPA AAAARPLTGA ALERSVVPPA AGTTK
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