| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3419 |
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| Symbol | |
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| ID | 4312154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 214516 |
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| End bp | 214995 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151261 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_775307 |
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| Protein GI | 115358169 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.58679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTATC TCGTACAGCT GACGGCCACG CTCGTGCTGG TGTCGATCGC GATGCAGGAC
CTGCGCGAGC GGCGCGTGTC CAATCGCGCG GTGCTGGCGT TCGCGATGCT GTACTTGATC
GCGGCGGCGC TCGTGCGCGA AGGGCTTGCG CCATTCGCCG GCCACGTCGC GACCGCCGCG
GCGATGCTGG TGGTGTTCGG CGCGCTGCGT CACGCGGGCT GGCTCGGCGG CGGCGACGTG
AAGCTGGCCG CGGCTGTGTT CCTGTGGGCC GGCCCGCCGC TCGCGTTGCC GGTGCTCACG
ATCGTCGGCG CGAGCGGCGC CGCGTGCGGC CTTGCGATGC TCGCTGGCCT CGCACGGCAG
CGTCGCGTCG CGCCTGCGCA CCCGATGGCG ACGCGCGGCG TGCCGTACGG CGTCGCGCTG
GCGTTCGGCG GCGCGCTGGC CGTCTGGGCG CCGTTTCCTC ACGCACTTTC GCTTACCTAG
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| Protein sequence | MLYLVQLTAT LVLVSIAMQD LRERRVSNRA VLAFAMLYLI AAALVREGLA PFAGHVATAA
AMLVVFGALR HAGWLGGGDV KLAAAVFLWA GPPLALPVLT IVGASGAACG LAMLAGLARQ
RRVAPAHPMA TRGVPYGVAL AFGGALAVWA PFPHALSLT
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