Gene Bamb_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3407 
Symbol 
ID4312267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp202405 
End bp202827 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID638151249 
ProductNUDIX hydrolase 
Protein accessionYP_775295 
Protein GI115358157 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAG CTCCCCTCTC CACGAAGCCG CCGGAAGGCA GTGCCGTCCC GATCAAGGAA 
CGGGCGACGA TCGTCTGCTA TCGCGATGAA CAGGTCCTGC TCGTGGCGCG CGCGACGTCG
CGCTGGGCGC TGCCGGGCGG CACCATCAAG CGCGGAGAAA CGCCGCTCGA AGCCGCGCAT
CGGGAACTGC AGGAAGAGAC CGGCATCACC GGCCAGGATC TCGTCTACTC GATGCAGTTC
ACCGGGCTCG CGAAGGTCCA TCACGTGTTC TTCGCCGAAG TCGGCCCGGA CCAGACGCCG
CAAGCGAGCA ACGAGATTCG GAAGTGCAAG TGGTTTCGCA TCGACAGCGT CGACGGCGTG
CGCGCGAGCA TCCCGACGAA GCGCATCGTC GAGCTCGTCT ACCGGCACGA ACTCCTCAAG
TAG
 
Protein sequence
MPQAPLSTKP PEGSAVPIKE RATIVCYRDE QVLLVARATS RWALPGGTIK RGETPLEAAH 
RELQEETGIT GQDLVYSMQF TGLAKVHHVF FAEVGPDQTP QASNEIRKCK WFRIDSVDGV
RASIPTKRIV ELVYRHELLK