| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3404 |
|---|
| Symbol | |
|---|
| ID | 4312264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 200225 |
|---|
| End bp | 201382 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638151246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_775292 |
|---|
| Protein GI | 115358154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.119763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC ATTTCTGGAA GGCCGCACTG TGTGCGGCCA TGGTGCCGTT CGCGCTGGCA
GGTTGCGGCG GCGGCGACGA TGGCGGCGCG CAGACCGGCA CGCTGCATGT CGCGATGACC
GATGCACCTT CATGCGGATT CGACCACGTC TACGTGACCG TCTCGCAGGT TCGCGTCAAT
GCGAATACGA ATGCTTCCGA TAACGATGCC GGCTGGTCGA CGATCACGCT GGCGACACCG
CGCAAGATCG ACCTGCTGTC GCTGACCAAT GGCGTGCTCG CCGATATCGG CCAGACCGCG
CTGCCGGCCG GCCAGTATCA GCAGATCCGC CTCGTTCTCG CGCCGAACCA GGGCAACAGC
CTCGCGAACT CGGTCGTTCC GACCGGCGGC ACCGAGCAGG CGCTTGCAAC GCCGAGCGCG
ACGCAAAGCG GCTACAAGAT CATCCAGCCA TTCACGGTGC AAGCGAACAC GCTCGTCGAC
CTCGTGCTCG ACTTCAACGC GTGCAAGTCG ATCGTTCAGC GCGGCAACGG CACGTATGCG
CTGAAGCCGG TCGTCACCGC GATCCCGACC GTCGTGAGCG GCGCGATCTC CGGCTATGTC
GCACCGGCCG AAGCTGGCGC GACCGTGTAT GCGGAACAGG GTGGCAAGGT GGTCAGGGGC
ACCGTTGCCG ACAGCACCGG GAAGTTCGTG CTGTCGCCGT TGATCCAGAG TTCGACGCAA
GGTAACTACG ACGTCGTGAT CGTGCAGAAC AACTTCGCGT CGGGCATCGT GCGCACGGTG
CCGGTCGTGG TGAACACGAC CACCGCCGTG TCGGCGTCGA ACGCGCCGAT CACGCTGCCG
GCCTCGACGA TGAGCTCGGT CAGCGGCACG GTGACGGCAA GCGCCGACGC GTTGGTGCGT
GCATTGCAGA CGGTCGATGC CCGCGCGTAC GAGATCACGT CGATCAACGC GAACATGGAC
ACGGGCGCCT ATGCGCTGAA CGTGCCCACG GCCGCACCGA TCGTCGGTAC GTACTCGGGC
TCGCTGCCGG TCGCGCTGGC TGCGTCGCCG GCTGCCGCGG CACAATATAC GATCGAGGCG
GACGCGGCAT CGGGCGCAAC GCAATCGACG AACGTGAACG CCACGACGAG CCAGCCGAAC
ATCAACTTCA GCTTCTGA
|
|---|
| Protein sequence | MNNHFWKAAL CAAMVPFALA GCGGGDDGGA QTGTLHVAMT DAPSCGFDHV YVTVSQVRVN
ANTNASDNDA GWSTITLATP RKIDLLSLTN GVLADIGQTA LPAGQYQQIR LVLAPNQGNS
LANSVVPTGG TEQALATPSA TQSGYKIIQP FTVQANTLVD LVLDFNACKS IVQRGNGTYA
LKPVVTAIPT VVSGAISGYV APAEAGATVY AEQGGKVVRG TVADSTGKFV LSPLIQSSTQ
GNYDVVIVQN NFASGIVRTV PVVVNTTTAV SASNAPITLP ASTMSSVSGT VTASADALVR
ALQTVDARAY EITSINANMD TGAYALNVPT AAPIVGTYSG SLPVALAASP AAAAQYTIEA
DAASGATQST NVNATTSQPN INFSF
|
|---|
| |