| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3357 |
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| Symbol | |
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| ID | 4312359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 151001 |
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| End bp | 151969 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151199 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_775246 |
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| Protein GI | 115358108 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.639146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTA CTGAAGCCGG CCGCCCGTCG CGCCGTGCGT TCGTCACGGG CCTGACGGGC
TTCACCGGCC GTTACATGGC GCAGCGGCTC GAAGCCGCCG GCTACGACGT GTGGGGCACC
GTGGCGCCCG GCGCGGCGCG GCCGGACGAT CCGGCGTTCG CGAACTGCAC GCTGCTGCCG
GTCGACCTGC TCGACGCGAA CGCGATGCGC GCGGCGGCGG CCGACGCGCG GCCCGATGCG
GTCGTGCACC TCGCCGCGCG TGCGCATGTC GCGCAGGACG AGCCGTCGCA AACCTACGCG
GTCAACATCG TCGGCACGCG CAACCTGCTG GCCGCGCTCG CGGGCCTCGA CCACCGTCCG
TCGGCGGTCC TGCTCGCCAG CAGCGCGAAC GTCTACGGCA ATTCGACGGC CGGCGTGCTC
GACGAAGCGA CCCCGCCCGC GCCCGCGAAC GACTACGCGG TCAGCAAGCT CGCGATGGAA
TACGCGGCGA AGCTGTGGGC CGACCAGTTG CCGATCGTGA TCGCGCGGCC GTTCAACTAC
ACCGGCGTCG GCCAGGACGA CGCCTATCTG CTGCCGAAGC TCGTGTCGCA CTATGCGCGC
AATGCGCCGC GCATCTCGCT CGGCAATCTC GACGTGAGCC GCGATTTCTC CGACGTGCGC
GACGTGACGG CCGCCTACCT GAAGCTGCTC GACGCGGCCC CGGCCGGCGA GACGTTCAAC
GTCTGCTCGG AGCGCGCGTA TTCGCTGAAG GAAGTGCTGG CGATGCTGTC ACGGATCGCC
GGCTACGTGA TCGACGTGAC GATCGACCCG CGTTTCGTGC GGCACAACGA AGTCAAGCGC
CTGAGCGGCT CGCGCGACAA GCTGCGGCGC GCGGTGGGCG AACTGCCCGT GACGCCGCTC
GACGACACGC TGCGCTGGAT GATGGAAGCG ATGCGCGACG TGCCGGGGCA GCCCGCGCAG
GCCGGCTGA
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| Protein sequence | MTRTEAGRPS RRAFVTGLTG FTGRYMAQRL EAAGYDVWGT VAPGAARPDD PAFANCTLLP
VDLLDANAMR AAAADARPDA VVHLAARAHV AQDEPSQTYA VNIVGTRNLL AALAGLDHRP
SAVLLASSAN VYGNSTAGVL DEATPPAPAN DYAVSKLAME YAAKLWADQL PIVIARPFNY
TGVGQDDAYL LPKLVSHYAR NAPRISLGNL DVSRDFSDVR DVTAAYLKLL DAAPAGETFN
VCSERAYSLK EVLAMLSRIA GYVIDVTIDP RFVRHNEVKR LSGSRDKLRR AVGELPVTPL
DDTLRWMMEA MRDVPGQPAQ AG
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