Gene Bamb_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3353 
Symbol 
ID4312355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp146512 
End bp147369 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID638151195 
Productsporulation domain-containing protein 
Protein accessionYP_775242 
Protein GI115358104 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.36909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATTT TCTCGTTCGG CAAGAAAGAC GACGACGCGC CCACCCGGCG CGGCGGTCGT 
ACCGGGGCCT CCCGGAACGT GCGCACGGAG CGCACTGAAC GCGTCGAGCG ACGCACGCGC
CGCACCGAGC GTCCGGAATC GGACGCACTG CTTCTCGATC CGACCCTTCC TGAAAAGCAA
CGCGCCCGCC GGCGTCTCGT CGGCGCGATC GCGCTCGTCG TCGGCGCGGT GATCGTGCTG
CCGATGGTGC TTGATTCGCA CCCGAAGCCG GTGACGGACG ACATCGCGAT CGATATTCCG
AACCGGCCTG CGCATCAGGC GGTCGCGCCG CGTGACGACG ACGTGGCCGA CGTGCAGGCG
GGCGTCGCGC ACGACGAGCC GCCGGCCTCC GATGTCGCGG TGGCGGCCGC GCCCGCACCG
GCGCCGAAGG ATACGGCCAA GCCGGCCGCG AAACCCGCTG CCACGACCTC GACGACCCCG
ACGACCACCG CGAGCGTGAC GCCGCCGAAG CCCGCTGCGA AGCCGGCCGC CCCTGCGGCG
AAGCCGGTCG CGCCGAAGCC GGCGCCGGCC CCCGCGACGG TCGCGAACGC CGACGCCGCG
ACCGACAGCG GCGACGCGTC GTCGCCCGCA TCGCCGGCCG GCGCGCGCTT CGCGGTGCAG
CTCGGTTCGT TCAAGGACGA CACGACGGCC CGTTCGTGGG CCACCAAGTT GAAATCCGCG
GGTGTGCCCG CATATGTCGA GCATCGCAAG CAGGCGGACG GCAGCACGGC TACACTGCTG
CGTGCCGGCC CGTTTGCGGA TCGCGCGGCG GCGTCAGCCG CGATCGCGAA GGTGCGCGAA
GCCGGACTGA CGCAGTAA
 
Protein sequence
MGIFSFGKKD DDAPTRRGGR TGASRNVRTE RTERVERRTR RTERPESDAL LLDPTLPEKQ 
RARRRLVGAI ALVVGAVIVL PMVLDSHPKP VTDDIAIDIP NRPAHQAVAP RDDDVADVQA
GVAHDEPPAS DVAVAAAPAP APKDTAKPAA KPAATTSTTP TTTASVTPPK PAAKPAAPAA
KPVAPKPAPA PATVANADAA TDSGDASSPA SPAGARFAVQ LGSFKDDTTA RSWATKLKSA
GVPAYVEHRK QADGSTATLL RAGPFADRAA ASAAIAKVRE AGLTQ