Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3328 |
Symbol | |
ID | 4312330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 119611 |
End bp | 120690 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638151170 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_775217 |
Protein GI | 115358079 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.686493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.496755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTAAAG CGCATGCGCT AGCGTACCGC GCTGTCGCCA ATGTCTTTCC GCGCTCCCTG AAGCCGCGTC TGGTGGCAGT TGCCGACGTG AGTGAGGCAG GTGCGCGGCA AGCCGCCGAG CAGTTTGGCT TCGAGCGCGC AACGAGTGAC TGGCGGTCGC TGCTTGACGA CCCCAGCGTA CAGGTCGTCT CCATTACGAC GCCGTGCAGC ATGCATCGGG AAATGGCATT GGCCGCAATT GCAGCGGGGA AACATGTGCA TTGCGAGAAG CCGATTGCGC CGTCTGCTCC CGACGCGCAC GAGATGATGA AGGCGGCCGA AGCCGCGAAC GTGGTCACGC AAGTCGGATA CAACTACATC AAGAACCCAA TCCTCAAATT GGCGCAAGCA ATGATTGCGT CCGGAGAACT GGGCGAAATC ACGAGCTTCC GCGGCATACA TGCGGAAGAC TATATGGCTG ACCCGGAGAT TCCCTACGGG TGGCGAGTCG ACCCTCAGAA CGGTGCCGGT GCGCTGGCTG AAATCGGCAA CCATATCGTC GGTATGGCGC GCTTCCTTCT CGGCCCGATT ACGCTGGTGA ATGCTCAACT CGAGACTGTC AACAAGACGC GCCCCGTCGC TGCAGGGTCG GCCGAGCGAC GGGAGGTCAA AGTCGATGAC ATCGCGCGAT TGATGGTGAC GTTCGACCGG GGATGCTCCG GCTCGATCGA AGCCAACTGG ACCGCGACCG GGCGCAACAT GCAACTTGAG TTCGAGGTCT ACGGGACCAA CGGTGCGCTG CTCTTCTCGC AGGAGCGCTT CAACGAGCTT CAATACTTCA AGGCCGGCGA CGACCCGCGG ACCACGGGAT TTGCTCGAAT CGAGGCCGGC CCTGTGCATC CTCCTTATGA ACACTTCACT GTAGCCGGCG GGCACCAGCT CGGCTTCAAC GACCTGAAAA CCATCGAAAT GGCGGAGTTT CTTGCGGCGA TCGAGCACAG GTCGCCCACA TTCCCCGACT TCCGCGAGGC CTGGGAAATC CAGCGGGTTG TCGATGCGGC AATTCGGTCG TCGACGGAGG GGCGGCGTAT CCGCCTCTAA
|
Protein sequence | MGKAHALAYR AVANVFPRSL KPRLVAVADV SEAGARQAAE QFGFERATSD WRSLLDDPSV QVVSITTPCS MHREMALAAI AAGKHVHCEK PIAPSAPDAH EMMKAAEAAN VVTQVGYNYI KNPILKLAQA MIASGELGEI TSFRGIHAED YMADPEIPYG WRVDPQNGAG ALAEIGNHIV GMARFLLGPI TLVNAQLETV NKTRPVAAGS AERREVKVDD IARLMVTFDR GCSGSIEANW TATGRNMQLE FEVYGTNGAL LFSQERFNEL QYFKAGDDPR TTGFARIEAG PVHPPYEHFT VAGGHQLGFN DLKTIEMAEF LAAIEHRSPT FPDFREAWEI QRVVDAAIRS STEGRRIRL
|
| |