| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3290 |
|---|
| Symbol | |
|---|
| ID | 4312149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 77476 |
|---|
| End bp | 78012 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638151132 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_775179 |
|---|
| Protein GI | 115358041 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.363067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.604346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACA TCCTCGCGAA ACAGACGCGC TACAGCTCGC CTGCGATCTT CTTTCACTGG
ATCATCTTCC TGCTGGTGGT GCTGGCCTAC CTCGCCATCG AGATTCGCGG ACCGAAAGGC
AGCGACAGTC GCGCGTTCTG GATGAACGTG CACTTGCTCG CGGGTACGTC CGTGCTCGTG
CTCTCGGTGC TGCGCGTGTT GTGGCGCGTG GTCAGCCGCG TGCCGGAGCC CATCGTGCAG
GCGCCGCTGC TCAAGTGGCT GTCGAAGCTC GCGCATTTCG CGCTGTACCT GTTCATCATC
GCCCAGCCGC TGCTCGGCAT CATGATGATC AACATGGGCG GCAAGCCCGT GTCGCTCGAC
TGGATCGGCG TGTCGTTCAC GCTGTTCGGC CCGGACAAGG CGCTGCGCCC GACGATCAAG
GAGGTCCACG AACTGCTCGG CAATGCGTTC TACTTCGTGA TCGGGCTGCA TGCGCTGGCC
GCGCTTTATC ACCATTTCGT GCGGCGCGAC GACGTGCTGC GACGCATGGC GCCGTGA
|
|---|
| Protein sequence | MRNILAKQTR YSSPAIFFHW IIFLLVVLAY LAIEIRGPKG SDSRAFWMNV HLLAGTSVLV
LSVLRVLWRV VSRVPEPIVQ APLLKWLSKL AHFALYLFII AQPLLGIMMI NMGGKPVSLD
WIGVSFTLFG PDKALRPTIK EVHELLGNAF YFVIGLHALA ALYHHFVRRD DVLRRMAP
|
|---|
| |