| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3188 |
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| Symbol | |
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| ID | 4310464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3525399 |
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| End bp | 3526265 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151029 |
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| Product | patatin |
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| Protein accession | YP_775078 |
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| Protein GI | 115353239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0264466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGACC AGATCGTCTT CGCGGGAGGT GGCAATCGCT GCTGGTGGCA GGCCGGCTTC
TGGGACGTCG CGCAGCCGGC GCTCGGCTTG CGCCCGCGCG TGATCGCCGG CATTTCGGCC
GGCGCGGCGA CCGCTTGCAT GTTGTATACG CGCGACGCCG CGTGGGTGAT GCGCTATTAC
GAGGACGCGC TGCGCCACAA CCGCAAGAAC GCGTACTGGG GCAACCTGTT CGGGCGCGAG
CCCGTGTTTC CGCATTACCG GATCTACCGC CAGGCGCTGC TCGACATCTA CGGCGAGCCG
TTCGCGCAAC TCGCCGACGC ACCGGAAATC CGCATCGGCG TGTCGCACGT GCCGCGCTGG
CTCGGCGCGC GCAGCGCGGT CGCCGCGGGC CTCGTCGCGT ACAACATCGA AAAGTACGTG
CGCAAGACGC TACACCCGAC GCTCGGGCGC ACGCTCGGCT TCCGGCCCGA ATTCGTGCGC
GCGCAGGCCT GCACGAGCGT CGACGAACTC GCCGACCTGA TCCTGCAGTC GTCGTGCACG
CCACCGTTCA CGCCGGTGCT GCGGCGCGGC GGCCGGCCGG TGCTCGACGG CGGCATGGTC
GACAACGTGC CGGTCGGCGC GCTCGACCCG TCGCCGGGCG ACGTGCTGGT GCTCGTCACG
CGGCTGTATC CGCGCCCGCA GATGTTTACG GTCGCGCACG GCGAGCAGCG GCGGCTCTAT
GTACAACCGT CGAGCAAGGT GCCGATTTCG AGCTGGGATT ACACGAGTCC GTCGCAGATG
CGGCATGCGT ACGACCTCGG GCGGCGCGAC GGCGAGCATT TCCTCACGCG CGTCGACGCG
ATGACAGGCG GCCGCGTGGC CGCCTGA
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| Protein sequence | MFDQIVFAGG GNRCWWQAGF WDVAQPALGL RPRVIAGISA GAATACMLYT RDAAWVMRYY
EDALRHNRKN AYWGNLFGRE PVFPHYRIYR QALLDIYGEP FAQLADAPEI RIGVSHVPRW
LGARSAVAAG LVAYNIEKYV RKTLHPTLGR TLGFRPEFVR AQACTSVDEL ADLILQSSCT
PPFTPVLRRG GRPVLDGGMV DNVPVGALDP SPGDVLVLVT RLYPRPQMFT VAHGEQRRLY
VQPSSKVPIS SWDYTSPSQM RHAYDLGRRD GEHFLTRVDA MTGGRVAA
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