| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3085 |
|---|
| Symbol | |
|---|
| ID | 4310777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3405363 |
|---|
| End bp | 3406508 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638150925 |
|---|
| Product | GumN family protein |
|---|
| Protein accession | YP_774975 |
|---|
| Protein GI | 115353136 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATG GTTTGGCGGC GCGCGCGTCA GACGTGCGCC GTTCGGGGAC TGGCAGCGCG
CGCGTGATGC GCGCGTGCCG CAACGCACGG CGCTGGAGCG TGCGCACGGT CACGGGCGCG
GCGCTGGCCG GCGCGTGCGT GGCCGCCAGC GTGCTGGTCC CGGCCGACGC CGCACGTGCC
GAAGGGCGCG CGCCGTCGAG TTCGCCGATC CATCCGTCGC AGGTACCGCC GCCCGGCCTG
AGCCTGCCGG GCTTCCACGC GCCGTCCGTG TCGAACGGCA CGGTCGCGCG CGGCACGGTG
CGCGTGCAGC CCGCGCGCAT GCCGTTCTAT GTCGCCACCC GCGGCCGGGT CACGCTGTAC
GTGCTCGGCA CGCTACATAC GGGCGACCCG TCCGACTACC CGAGTGCCCA GCCGTTCCGG
CCGCGCATCC TCGGGGCGCT GGCCGCGTCG CCGACGCTCG CGCTCGAGCT GTCGCCGGAC
GATCTGCTCG AATCGCAGGA CGACGTGTCG AAGTACGGCG TGTGCCGCTA CCCGTGCCTG
CAACGCCTGC TGCCCGAGCC GCTGTGGCAG CGGCTCGCCG CGCGCCTGCG CGGCAATCCG
GCCGCGCTCG TGGAGATCCG CCGGATGCGG CCGTGGCTCG CGGCGCTGGT CGTCGAGACC
TACGACTCGC TGTCGGCCGG CCTGCAGACC GAATACGGCA CCGAGGCGCA GCTGCAGAAC
GTGTTCCTGA AGAAGAAGGG CGGCCGCGTG ATCGGGCTCG AGACGCTGGC CGAGCAGATG
CGTGCGTTCA CCGGGCTGAC ACTCGCCGAG CAGCGCGAGA TGCTCGCGCA GGACATGGTG
CAGACGCCGG CGCAGAACGC GGCCGACATC AAGGCGCTGC ACCGGCTGTG GCAAATTGGC
GACGCCGATG CGATCGCCGC GTGGGCGGTC GCGAAGAGCG AGCGGCTGGC CCGGTCGAAG
GCGCTGTCGG CGTCGATCGA CAACAAGATC CTGTACGAGC GCAACCGGCG CTTCGTTGCA
CGAATGACGG CAATCGCCGC GCCGGACAGG CCGGTATTCG TCGCGATCGG CGCGCTGCAT
TTGGGCGGCC CGCGCGGCGT GCTCGAATTG TTGCGCCGGC AAGGATACCG GGTCGACGCG
AACTGA
|
|---|
| Protein sequence | MPDGLAARAS DVRRSGTGSA RVMRACRNAR RWSVRTVTGA ALAGACVAAS VLVPADAARA
EGRAPSSSPI HPSQVPPPGL SLPGFHAPSV SNGTVARGTV RVQPARMPFY VATRGRVTLY
VLGTLHTGDP SDYPSAQPFR PRILGALAAS PTLALELSPD DLLESQDDVS KYGVCRYPCL
QRLLPEPLWQ RLAARLRGNP AALVEIRRMR PWLAALVVET YDSLSAGLQT EYGTEAQLQN
VFLKKKGGRV IGLETLAEQM RAFTGLTLAE QREMLAQDMV QTPAQNAADI KALHRLWQIG
DADAIAAWAV AKSERLARSK ALSASIDNKI LYERNRRFVA RMTAIAAPDR PVFVAIGALH
LGGPRGVLEL LRRQGYRVDA N
|
|---|
| |