Gene Bamb_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3081 
Symbol 
ID4310773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3401601 
End bp3402173 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content63% 
IMG OID638150921 
Productputative transcriptional regulator 
Protein accessionYP_774971 
Protein GI115353132 
COG category[K] Transcription 
COG ID[COG5631] Predicted transcription regulator, contains HTH domain (MarR family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGGC TTCTGTCGTA CACTCGGCAC ACCCTGTCAT CCGGCTTGCG CCGCCTTTCC 
ATGAAGCGTC CTGCGACCAA GATCGTGTCA TCCGAACACC TCGTTTCCGA GTCGAGCGCC
GAGCTGTCGG AACTCGAATA CGGCCTCATC ATGGCCGGCA ACGCATTCAA CCGATGGATG
GTGCGCTGCA TGTCGGCCGC GGGCGCGAAG GACATGACGG CGGTCGAGGT GTCGCTGCTG
CATCACGTGA GCCATCGCGA ACGCAAGAAA AAGCTCGCCG ACATCTGCTT CGTGCTCAAT
ATCGAGGATA CGCACGTCGC GACCTACGCG CTGAAAAAAC TGATCGCGCG CGGCTATGTG
AAAAGCGAGA AGAGCGGCAA GGAAGTGTTC TTCTTCGCGA CCGACGCGGG CCGCGAGCTG
TGCCTGAAGT ATCGCGAGGT GCGCGAGCAT TGCCTGATCG AGACGCTGAA GGACAGCGGC
CTCACCAACG CGCAGATCGG CGACGCGGCG CAACTGCTGC GCCACGCATC GGGCCTCTAC
GATACGGCCG CGCGGGCGGC GGCCTCGCTG TAA
 
Protein sequence
MPGLLSYTRH TLSSGLRRLS MKRPATKIVS SEHLVSESSA ELSELEYGLI MAGNAFNRWM 
VRCMSAAGAK DMTAVEVSLL HHVSHRERKK KLADICFVLN IEDTHVATYA LKKLIARGYV
KSEKSGKEVF FFATDAGREL CLKYREVREH CLIETLKDSG LTNAQIGDAA QLLRHASGLY
DTAARAAASL