Gene Bamb_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3075 
Symbol 
ID4310767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3394938 
End bp3395747 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID638150915 
ProductXRE family transcriptional regulator 
Protein accessionYP_774965 
Protein GI115353126 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAG ACCTCATGCG TATCGGCCAG CGCATCCGGC GCCTGCGCCG GGAAGCGAAG 
AAGACGCTGC TGGAAGTCGC GACCGAGGCG AACCTGTCGA TCGGATTCCT GTCGCAGGTC
GAGCGCAATC TCACCGGGAT CTCGCTGTCG TCGCTCGTCA ACGTCGCGAC GGCGTTGAAC
GTGCCGCTCG GCACGCTGAT CGAGCAGCCG CGCCAGGCGC AGCCCGACTC GCGCGCGGGC
CGCCGCGAAC CGTACGCGGT CGACGCCACG TCGCAATGGT ACGAACGGCT GTCGACCACC
TTCGACGGCA GCCAGATCCA CGCGCTCAAG GTCCGGATGA TGGAGGGCTA TCGCTCGGAA
TGGGTTGCGC ACGGCGGCGA CGAGTTCGTG TACGTGCTGA CCGGCCGCGT CTGCTACACG
ATCGGCAAGA AGGATTACCC GCTGTCGCCC GGCGACTCGC TGCACTTCGA CGCGCGCAAG
CGCCATCGCG TCGCGAATGT CGGGGACGGG CCGGCCGAAC TGATCGCGGT CGGCACGCTG
CCGCTCTTCG ACGACAGTTG CGCCGAGTTC GGCTCCGCGA CAATGGAAAT CAGGCCGCCC
GCGCGCGATG CCGGCCCGAC GCCGGGCGAG CCGCGCGTGA GCCGCCGCGA ACCGGCGCAG
AAACGAGAGC ACGAGCACGC CGCGAACACG GCCGCGCCTG CCGCCGACCT GCCGGCCCGC
GTGGCGGCCA AGCCGGCGGC CAAGCCCGCT GCCGGCAAGC CGCGCGCGAC CACGGGCAAA
CGCCCGGCCG CCACCCACAC GAAGCAATGA
 
Protein sequence
MDSDLMRIGQ RIRRLRREAK KTLLEVATEA NLSIGFLSQV ERNLTGISLS SLVNVATALN 
VPLGTLIEQP RQAQPDSRAG RREPYAVDAT SQWYERLSTT FDGSQIHALK VRMMEGYRSE
WVAHGGDEFV YVLTGRVCYT IGKKDYPLSP GDSLHFDARK RHRVANVGDG PAELIAVGTL
PLFDDSCAEF GSATMEIRPP ARDAGPTPGE PRVSRREPAQ KREHEHAANT AAPAADLPAR
VAAKPAAKPA AGKPRATTGK RPAATHTKQ