Gene Bamb_3025 details

Gene Information

• Locus tag: Bamb_3025
• ID: 4310507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3344444
• End bp: 3345187
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 638150865
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_774915
• Protein GI: 115353076

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTTT CAGCCGATAC GTCGACCCCG CGCATCGCGC TCGTCGCAGG CGCGCTGGAC 
AGCGCGGCCG ACGCCGCGTC GCTCGGTCGT GCGCTCGCGA CCGCCTTCGC GCAGCGCGGC 
TGGGACGTCG CGCTGCAACG CAGCGCCGGC GCGCCGCGCG CGGCCGGCGA CGCGCTCGTC 
GCCGAAGTCG CCGCCCGCGG CCGCCGCGCG GCCGTGCTTG ACGCCGATCT GGCCCTGGAA 
GCCGACGCGG GCGCGCTGGT GGCCGCTTGC GGCACGGCGC TCGGCCGGCC CGCCTGTGCG 
GTGTTCGTGA GCGCGTGCGC CGGCACCGAC GACGCGCAGA CGGTGGATGG CGCATCGCTC 
GCCGGCGCGC TTGCCCGCAA CGTCACAGCG CCGCTCGCAC TGGCCCGCGC GCTCGCCGAT 
GCGACGCCCG ACGCCGCGCG CGACGACGAA ACACTGCGCG CGTGCGTGAT CCACGTGCTG 
GACCAGGCGC TGTTTCATCC GGCGCCGGCC CGGCTGTCGC ACGCGCTGAT GCAGGCCGCG 
CTGAACCGCG CGACCGCCGC GCTGGCGCTG GCCCTCGCGC CGAAGGTGCG TGTCGCGGCG 
CTCGTGCGCG GCCACGCGCC GCACGCGGAC GACATCGCGG CGGCGGCCTG CTATCTCGCG 
ACCGCGCCCG GCGTCACGGG CGCGACGCTG ACCGTCGACG GCGGCGAGCA CCTGGTGCCG 
CCCGCCGCCG GCCCGAATGA ATGA 

 

Protein sequence

MTVSADTSTP RIALVAGALD SAADAASLGR ALATAFAQRG WDVALQRSAG APRAAGDALV 
AEVAARGRRA AVLDADLALE ADAGALVAAC GTALGRPACA VFVSACAGTD DAQTVDGASL 
AGALARNVTA PLALARALAD ATPDAARDDE TLRACVIHVL DQALFHPAPA RLSHALMQAA 
LNRATAALAL ALAPKVRVAA LVRGHAPHAD DIAAAACYLA TAPGVTGATL TVDGGEHLVP 
PAAGPNE