| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3015 |
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| Symbol | |
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| ID | 4310602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3333628 |
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| End bp | 3334704 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150855 |
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| Product | porin |
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| Protein accession | YP_774905 |
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| Protein GI | 115353066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT TCGCTCGCCG TGCGTCGCGC ACGTCCGTCA AGCTGATCGC CGCGGCCACC
TGCGTGGCGG CCGCCGCACC CGTCCACGCG CAGTCGAGCG TTTCGCTCTA CGGTCAGGTG
GACGAATGGA TCGGCGCAAC CAAGTTCCCG GGCGGCGATC GCGCGTGGAA CGTGTCGGGC
GGCGGGATGT CGACCTCGTA CTGGGGCCTG CACGGTGCGG AGGATCTCGG CAACGGCTAC
AAGGCGATCT TCACGCTGGA GAGCTTCTTC CGCGCGCAGA ACGGCCAGTT CGGGCGCTTC
CAGGGCGATA CGTTCTTCGC GCGCAACGCG TACGTCGGCG TCAGCTCGCC GTACGGCACG
GTGACGGCAG GCCGCCTGAC CACGCACCTG TTCCTGTCGA CGATCCTGTT CAACCCGTTC
TACGATTCGT ACACCTTCTC GCCGATGGTG TACCACGTGT TCCTCGGCCT CGGCACGTTC
CCGACCTATC CGAGCGACCA GGGCGCGGTG GGCGATTCGG GCTGGAACAA TGCGCTGTCG
TACACGTCGC CTTCGTTCGG CGGCCTGAAT TTCGGCGCGA TGTACGCGCT CGGCAACACG
GCCGGCGACA ACCGCTCGAA GAAGTGGAGC GCGCAGTTCA ACTACGCGAA CGGCCCGTTC
GCCGCGACCG CCGTCTACCA GTACGTGAAC TTCAACAACG GCCCGCAGGA CCTGAGCTCG
CTCGTGACCG GCATGAAGAG CCAGGGGATC GGGCTGGTCG GCGCGACCTA CGACCTGAAG
TACGTGAAGC TGTTCGGCCA GTATATGTAT ACGAAGAACG ACCAGGTCGC CGGCAGCTGG
CACGTGAATA CCGCGCAGGG CGGGGTGTCG GTGCCGCTCG GCGTCGGCAA CGCGATGGCG
TCGTATGCGT ACTCGCGCGA CGGCGGCGGC CTCGACCAGA CGCGCCAGAC CTGGGCCGTC
GGCTACGACT ATCCGCTGTC CAAGCGCACC GACGTCTACG CCGCGTACAT GAACGACCAC
ATCAGCGGCC TGTCGAGCGG CAACACGTTC GGCGCAGGCA TCCGCGCAAA GTTCTGA
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| Protein sequence | MKAFARRASR TSVKLIAAAT CVAAAAPVHA QSSVSLYGQV DEWIGATKFP GGDRAWNVSG
GGMSTSYWGL HGAEDLGNGY KAIFTLESFF RAQNGQFGRF QGDTFFARNA YVGVSSPYGT
VTAGRLTTHL FLSTILFNPF YDSYTFSPMV YHVFLGLGTF PTYPSDQGAV GDSGWNNALS
YTSPSFGGLN FGAMYALGNT AGDNRSKKWS AQFNYANGPF AATAVYQYVN FNNGPQDLSS
LVTGMKSQGI GLVGATYDLK YVKLFGQYMY TKNDQVAGSW HVNTAQGGVS VPLGVGNAMA
SYAYSRDGGG LDQTRQTWAV GYDYPLSKRT DVYAAYMNDH ISGLSSGNTF GAGIRAKF
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