Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2845 |
Symbol | |
ID | 4310852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3139397 |
End bp | 3141409 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150684 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_774735 |
Protein GI | 115352896 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0613147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTGTGA TTTCCCCGCT CGAAATGACC CTGCTGCTGC TGCTGGCCTC GGTGGTGGGC GTCGTCGTCT TTCGTTCGTT GAACCTGCCG CCGATGCTCG GCTACCTGAC CGTCGGCATC CTGGTTGGCC CGCACTCGCT AGGCATCGCC GCGGACCTCG AACGGGCCGA GCACCTCGCG GAATTCGGCG TGGTATTCCT GATGTTCTCG ATCGGCCTCG AATTCTCGCT CGCGAAGCTG AGGGCGATGC AGCGGCTCGT GTTCGGGCTC GGGCTGCTGC AGGTGGTCGT GACGCTCGTG CTCGCGGTCG CGCTCGGCGC GCTGTTCGAG CGCTGGGTGC ACATCACGTG GCAGGGCAGC GTCGCGCTCG GCGGCGCGCT CGCGATGTCG TCCACGGCGA TCGTATCGAA GATGCTCGCC GAGCGGCTCG AGATCGAGAC CGAGCACGGC CGCAACATCT TCGGCGTGCT GCTGTTCCAG GATCTCGCGG TGGTGCCGCT GCTGATCGTG ATCGCCGCGT TCGGCGCGGA GTCGTCGAAG GATCTCGCGA TCACGCTCGG CTTCGCGGCG GTCAAGATCG TGATCGCGCT CGCGCTGCTG CTCGTCATCG GCCAGCGCTT CATGACGCGC TGGCTCAACG TGGTCGCGCG GCGCCGCTCG CAGGAACTGT TCGTGCTGAA CCTGCTGCTC ATCACGCTCG GCGCCGCGTT CATCACCGAC CGCTTCGGGC TGTCGCTCGC GCTCGGCGCG TTCATCGCGG GGATGCTGAT CTCCGAGACG CCGTTCCGTC ATCAGGTGGA AGAGGACATC AAGCCGTTTC GCGACGTGCT GCTCGGGCTG TTCTTCGTGA CGACCGGGAT GCTGCTCGAT GCGCGCGTGA TCTGGGAGCA CCCGTTGCTC GTGCTCGGCT TCTTCGTCGG GCAGATCCTG TTCAAGGGGA CGATGATCGC GGGGCTCGCG CGCCTGTTCG GCGCGACGCC GGGCGTCGCG ATGCGCACCG GCATCGGGCT CGCGCAGGCC GGCGAATTCG GCTTCGTGCT GCTGAACCTG ATCCTCGACC GGCATCTCGT CGATTCGACG CTGCTGCAGG CGATCCTCGC GTCGATGCTG CTGTCGATGC TCGCCGCACC GTTCCTGATC CAGAACGCCG ACCGGATCGT GATGCGGCTG TCGTCGACGG AATGGATGCA GCAGTCGCTG CAGATGACGC GGATCGCGAC GCAAAGCCTC AAGCAGCGCG GCCACGTGAT CATCTGCGGC TACGGCCGCG CGGGCCAGAA CCTGGCGCGC ATGCTCGAGC AGGAAGGCAT TTCGTATGTC GCGCTGGACC TCGACCCCGA TCGCGTGAGC GCGGCCGCGA CCGCCGGCGA ATCGGTCGTG TTCGGCGACG CGGCGCGTCG CGAGTCGCTG CTCGCGGCCG GTATCCATCG CGCGGCGGCC GTCGCGATCA CGTATGCGAA CACGCCGTCC GCGCTGCGCG TGCTGCACCA CGTGCACGAG CTGGAGCCGA CGCTGCCGGC GATCGTGCGC ACGGTCGACG ACGCCGATCT CGAGAAGCTG CTCGCGGCCG GCGCGACCGA GGTGATTCCG GAAATCGTCG AGGGCAGCCT GATGCTCGCG TCGCACACGC TGGTGCTGGT CGGCGTGCCG ATGCGCAAGG TCGTGCGGCG CGTCGAGGAG ATGCGCGACG CGCGTTACCA GCTGCTGCGC GGCTATTTCC ACGGCGCCGA CGACGCGGAC GACGACGATC ACGAGCAGGT GCGGCTACAA TCGGTGCCGG TCGACGCGCG CGCGGATGCG GTCGGGCGCT CGCTGGAGGA GCTCGGGCTG TATGCGCTCG GGCTGGAAGT CACGGCGATC CGCCGGCACG GGATTCGCGG TGTCGAACCC GACCCGCTGA CCAAGCTGCG CGCGAGCGAC ATCGTCGTGC TGCGCGGGCT GCCCGAGGCG CTCGCGCTCG CGGAAGAGCG GCTGTCGCGC CATCGGCGCG AGCCGCCGGC CGCGGTCGCC TGA
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Protein sequence | MPVISPLEMT LLLLLASVVG VVVFRSLNLP PMLGYLTVGI LVGPHSLGIA ADLERAEHLA EFGVVFLMFS IGLEFSLAKL RAMQRLVFGL GLLQVVVTLV LAVALGALFE RWVHITWQGS VALGGALAMS STAIVSKMLA ERLEIETEHG RNIFGVLLFQ DLAVVPLLIV IAAFGAESSK DLAITLGFAA VKIVIALALL LVIGQRFMTR WLNVVARRRS QELFVLNLLL ITLGAAFITD RFGLSLALGA FIAGMLISET PFRHQVEEDI KPFRDVLLGL FFVTTGMLLD ARVIWEHPLL VLGFFVGQIL FKGTMIAGLA RLFGATPGVA MRTGIGLAQA GEFGFVLLNL ILDRHLVDST LLQAILASML LSMLAAPFLI QNADRIVMRL SSTEWMQQSL QMTRIATQSL KQRGHVIICG YGRAGQNLAR MLEQEGISYV ALDLDPDRVS AAATAGESVV FGDAARRESL LAAGIHRAAA VAITYANTPS ALRVLHHVHE LEPTLPAIVR TVDDADLEKL LAAGATEVIP EIVEGSLMLA SHTLVLVGVP MRKVVRRVEE MRDARYQLLR GYFHGADDAD DDDHEQVRLQ SVPVDARADA VGRSLEELGL YALGLEVTAI RRHGIRGVEP DPLTKLRASD IVVLRGLPEA LALAEERLSR HRREPPAAVA
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