| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2752 |
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| Symbol | |
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| ID | 4310448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3031095 |
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| End bp | 3032732 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638150591 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_774642 |
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| Protein GI | 115352803 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATT CGAACGACTT CCTCATTCCG CTGATCCCGC CGCTGCTCGC CATGCTCGGG
CAGGCCGCCG ACGCGCACGC GCGCGGCGAG CACGATGCGC ACGCGCTGTG GCTCGCCGCC
GCCGGCCATC TGCACGCGGT CGACATGGCC GCGCTCGCGC AGCTCACGTC GGCGCTCGTC
GCGCGACAGC GCGCGGCCGA CGCGCTCGCG CTGGCCGAAT GCGCGGTGCG CGTGCATCCG
GGCGCCGGTG CCCGTTTCAA TCACGGCTAC GTGCTGCAGA TGCTCGGCCG TCACGCCGAG
GCCGTCGCGC CGTATCGCGC CGCCTATGCG CTCGATCCGC GCTGGCCGTC GCTGCGCAAC
AACCTCGCGA TCGCGCTGCG GCTGTCGGGC GGCGACCGCA ACGAGGAAAT CGCGCTGCTC
GACGCGGCCG TGGAGGCCAA TCCGCACGAC GTGCAGGCGT GGATCAACCT GGTCGTCGCG
CGGCTCGCGG CCCAGGACCT CGACGGCGCG CTCGCCTGTG CGGCGCGGCT CGCGCAGATC
GCGCCCGACA ATGCGCTCGC GCTGAACAAC ATCGCGATGG CGATGAAGGA AGCGCAGCGC
TGGGACGACG CCGAGCGCTA CGCGGCGCGT GCGTGCGAAC TGGCGCCCGA CGACGCGTCG
TTCCGTTTCA ATCTCGCGAT CATCCAGCTC GTGCGCGGCA ACTACGCGGC CGGCTGGCGC
GGCCACGAGG CGCGCTGGGA CGGTGCGGGC GAGCTGCGCG GCCGCCGGCC GGCGCTGCCG
GGCCCGCGCT GGCAGGGCGA GCCGCTCGCG GGCAAGACGC TGCTCGTGTG GGGCGAGCAG
GGGCTCGGCG ACGTGCTGCA GTTCGCGCGC TTCGTCGCGC CGCTCGCCGA GCGCGTGCAC
CGCGAGGGCG GCCGGCTCGC GTGGAACACG TTTCCGCAGG TGGGCACGCT GATGCAGCGC
AGCCTCGGTG CGCATGCGGA CGCGTTCAGC GCGGGCGGCA GCGTCGACGA GTTGCCCGCC
TTCGACTACG AAGTGCCGCT GATCGGGCTG CCGCTGATGC TCGGGATGGA GACCTCGACG
CTCGGCGAGT CGGTGCCGTA CCTGCATGCC GACCGCCACG CGCGCGACGC GTGGCGCGCG
CGGCTCGCGG GCGATGGCCG GTTGAACGTC GGGCTCGTCT GGACGGGCAG TCCGGGACAC
CAGCGCAACC CGTTCCGGCG CGTCGGGCTC GATCGCTACG CCGATGCGTT TCGCGGTATC
GACGGCGTCA CGTTCCATTC GCTGCAGCCG GGCGCGGATG CGGATGTCGC CGCGGCGCGC
GCGGCCGGTT TCGCGATCGA GGACTACACG GCCGAACTGA AGAGTTTCGA CGATACGGCC
GCGTTCATCG GCGCGCTGGA TCTGGTGATC ACGGTGTGCA CGTCGGTCGC CCATCTGGCG
GGCGCACTGG GCGCGCGCAC CTGGGTGCTG CTCGACGTGA ATCCGCACTG GCCGTGGCTG
CTCGAACGGA CCGACAGCCC GTGGTATCCG ACCGCCACGC TGTACCGGCA GCCGACGTTC
GGCGCATGGG CGCCGGTGAT GGCGGCGCTC GGGCGGGATC TGCGCGGCCT GGCCGCGCAG
GCGAAGCGGC CGGCCTGA
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| Protein sequence | MDDSNDFLIP LIPPLLAMLG QAADAHARGE HDAHALWLAA AGHLHAVDMA ALAQLTSALV
ARQRAADALA LAECAVRVHP GAGARFNHGY VLQMLGRHAE AVAPYRAAYA LDPRWPSLRN
NLAIALRLSG GDRNEEIALL DAAVEANPHD VQAWINLVVA RLAAQDLDGA LACAARLAQI
APDNALALNN IAMAMKEAQR WDDAERYAAR ACELAPDDAS FRFNLAIIQL VRGNYAAGWR
GHEARWDGAG ELRGRRPALP GPRWQGEPLA GKTLLVWGEQ GLGDVLQFAR FVAPLAERVH
REGGRLAWNT FPQVGTLMQR SLGAHADAFS AGGSVDELPA FDYEVPLIGL PLMLGMETST
LGESVPYLHA DRHARDAWRA RLAGDGRLNV GLVWTGSPGH QRNPFRRVGL DRYADAFRGI
DGVTFHSLQP GADADVAAAR AAGFAIEDYT AELKSFDDTA AFIGALDLVI TVCTSVAHLA
GALGARTWVL LDVNPHWPWL LERTDSPWYP TATLYRQPTF GAWAPVMAAL GRDLRGLAAQ
AKRPA
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