Gene Bamb_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2688 
Symbol 
ID4310034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2960907 
End bp2962097 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID638150526 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_774578 
Protein GI115352739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGTTC TCCCGATCGC TATTTACGGA TATACGGAAA TGACATCAGG GTGGGACACG 
GTATCGACCG AATTCATGCG CAACGACAAG CCGTACGGTG CGGGCGCATT TCGCGTGCAA
CGCAACGATT TCATGTCACT GAAGGTTGCG CGACCGGAAC TCAAGTTCAA GCCGGAGAGC
GAGCAGAAGA ACCCTGACCT CGCGGAATTC ACCGAAGCTT GGATGGACGA TTCGAACCAG
CGGCTGAACC GGTCGACCGT CAGTTTCCTG CGCGGCACGC TGGACGGGAG CGCCGTGCGC
CACTTCCAGC AACCGGGCCA GACCGCGTCA TGGTGGTACT CGCCTGACTG GCAGGTCCTG
TACGTCAGTA CGGGCTGGAT GGATTACGCG GCGCCGCGCA CCGTCGACGG TGCGTCCCCT
CAGACAACCC GACTCTGGAA GTCGAGCGAC GGTGGCCAGC ACTGGGCCCA GCTCGAATGG
CCGATGGAGC GCAACATCAA CCGCTTGCTG TTCATTGATG CGCAACGGGG CTACGCCATC
GGATGGGGAC CCCGCGTGTG GCGAACGGCG GACGGCGGGC AATCGTGGCA GGAAATCAAG
GAACCGCCGG GTGCCGCCCT TCAGGACAAG CCACGCCGGA CTTTCGACGG GACCAACCTC
GGTCCCGACG GTGTATTGCG CATTGCCTAT CAGGTTGAAG ACGCCGAGCA TCCGCAACCG
GCAACGGTGG TCTGGCGGCT CGATTGGAAT CAGCAGGATT TCATCCGGGA AGCGGTGCTC
CCCGGACAAG TCATCGTCAG CCTCGAATCG TCGCCGGCCC CCGTCCGGAA TTACGCACTG
TATGCGTTGT CGCGTACAAG CGGCGAATCC GGCAGCGGTC ATGGTGCGGG CGTCATTTCG
ACCTGGACTA GCGAGCACCC CGAACACATC CAGGAACTGC ATGCGTTTGA CAGCCCGCTG
ACGCTCAACG GACTGAGCGC GGGTCGCAAC GGCGTCCTGC TGGTCCACGC GACCGACCCG
AACACCGCAA ACGGCGGCGG CGCACCGATC GACCTGACGA TCAGCAGCAC CGACGGTGGA
AAGACATGGC AGCAGACCGC CGACAAGGCT TCACAGGGCG GCTACTTCGA TCCACAAACG
AACACGCTCT ATTCGGTGTT CGCCTATACG CTGCGGAAAC GGCAATTCTG A
 
Protein sequence
MLVLPIAIYG YTEMTSGWDT VSTEFMRNDK PYGAGAFRVQ RNDFMSLKVA RPELKFKPES 
EQKNPDLAEF TEAWMDDSNQ RLNRSTVSFL RGTLDGSAVR HFQQPGQTAS WWYSPDWQVL
YVSTGWMDYA APRTVDGASP QTTRLWKSSD GGQHWAQLEW PMERNINRLL FIDAQRGYAI
GWGPRVWRTA DGGQSWQEIK EPPGAALQDK PRRTFDGTNL GPDGVLRIAY QVEDAEHPQP
ATVVWRLDWN QQDFIREAVL PGQVIVSLES SPAPVRNYAL YALSRTSGES GSGHGAGVIS
TWTSEHPEHI QELHAFDSPL TLNGLSAGRN GVLLVHATDP NTANGGGAPI DLTISSTDGG
KTWQQTADKA SQGGYFDPQT NTLYSVFAYT LRKRQF