| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2496 |
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| Symbol | cobD |
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| ID | 4310122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2754956 |
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| End bp | 2755894 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638150333 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_774386 |
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| Protein GI | 115352547 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.315833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCGC TGCCCGTCGT CGCGATGCTC GCGGTCGCGG CCGCGATCGT CGATCGCATC
GTCGGCGAAC CGGCCGGCTG GCATCCGCTC GTCGCGTTCG GCCGGCTCGC CGGCCGCATC
GAAGCCGCGC TGAACACGGG CCGGCGCGGC CGCGTGGTCG GCGTCGCCGC ATGGGTCGCG
GCGGTGGTGC CGCCGGTTGC CATCGCCGCG TGGCTCGCGG CCGTGCTGCC CTGGCCGCTC
GCGGCCGCGC TGCACGTCGC GCTGCTGTGG TTCGCGCTCG GCGCGAAGAG CCTCGCCGAT
CACGTCGCCC CGATCGCCGC CGCGCTGCTG CGGCACGATC TCGACGCCGC ACGCGCGCTG
ACCGCGCGCA TCGTGTCGCG CGACACCAGC GAAGCCGACG AAGGCGCGCT GTCGCGCGCG
GCCGTCGAAT CGGCGCTCGA GAACGGCAAC GACGCGATCT TCGGCGCGCT GTTCTGGTTC
GTGGTCGCCG GCGGCCCCGG CGCGCTGCTG TTCCGGCTCG CGAACACGCT CGACGCGATG
TGGGGCTACC GCACGCCGCG CTTCCTGACC TTCGGCTGGG CTGCCGCGCG CCTCGACGAC
GCGCTCAACT GGATTCCCGC GCGCCTCACC GCCGCGAGCT ACGCGCTGCT CGGCGACACG
GCCGCCGCGT GGCGCTGCTG GCGCACGCAG GCACGCCACT GGGACAGCCC GAACGCGGGC
CCCGTGATGG CCGCGGGCGC CGGCAGCCTG AACGTGCAGC TCGGCGGCCC GGCCGTCTAT
CACGGCCAAA TCGAAGACCG TCCCGCGCTC GGCACCGGCG CGAGCGCGAC GGCCGTGCAC
GTGGTCGCCG CGCTGTCGCT CGTCACGCGC ACGCTCGCGC TGTGGCTCGC GCTGCTCGTC
GCGAGCGGCG CACTCATCCT CGCTACCCAT CATGTCTGA
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| Protein sequence | MLSLPVVAML AVAAAIVDRI VGEPAGWHPL VAFGRLAGRI EAALNTGRRG RVVGVAAWVA
AVVPPVAIAA WLAAVLPWPL AAALHVALLW FALGAKSLAD HVAPIAAALL RHDLDAARAL
TARIVSRDTS EADEGALSRA AVESALENGN DAIFGALFWF VVAGGPGALL FRLANTLDAM
WGYRTPRFLT FGWAAARLDD ALNWIPARLT AASYALLGDT AAAWRCWRTQ ARHWDSPNAG
PVMAAGAGSL NVQLGGPAVY HGQIEDRPAL GTGASATAVH VVAALSLVTR TLALWLALLV
ASGALILATH HV
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