Gene Bamb_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2443 
Symbol 
ID4308830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2690345 
End bp2692102 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content65% 
IMG OID638150280 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_774333 
Protein GI115352494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4986] ABC-type anion transport system, duplicated permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.343058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTCG GATTCTTCAA TCCGAACCGG ACCGCCAACG CGTCCGCGTG GCGCGTTCTG 
CCGAACCGGT GGGACTTCAT CGCATTCCCG CTGATCATCT GCCTGATCGC GATGGCGGTC
GTCGGCTTTC ATGAAACGAT GGCGCCGATC GGGACCCTTC AGACCCAGAA GATCTCGCTC
GATCCGTCGA ACCTGCCCGA ATACGCGTTG CGCACGACGC TGCGGATGCT TGCCGCGATG
GTCGCGTCGC TCGCGTTCAC GCTGATCTAC GGCACGCTCG CCGCGAAAAG CCGCCGCGCG
GGGATGGTGC TGATCCCGAT CCTCGACATC CTGCAGTCGG TGCCGGTGCT CGGCTTCATC
TCGTTTACGG TCACGTTCTT CCTCGCGCTG TTCCCGAGCC GCGTGCTCGG CGCGGAGCTC
GCGGCGATCT TCGCGATCTT CACGAGCCAG GCGTGGAACA TGACGTTCAG CTTCTACCAG
TCGCTGCGCA CGGTCCCGCG CGATCTCGAC GAAGTGTCGC GCGGCTTCCA CCTGACGTCG
TGGCAGCGCT TCTGGAAGCT CGAGGTGCCG TTCTCGATGC CCGGGCTGAT CTGGAACATG
ATGATGTCGA TGTCGGGCGG CTGGTTCTTC GTCGTCGCAT CGGAGGCCAT TACCGTCGGC
AACCAGACGA TCACGCTGCC GGGGATCGGC GCGTATCTCG CGCAGGCGAT CTCGGACAAG
AACTTCGGCG CGATCGGCTG GGTCATCCTC ACGATGACGG TCGTGATCCT CGCGTACGAC
CAGTTCCTGT TCCGCCCGCT GATCGCGTGG GCCGACAAGT TCCGGATGGA GAACACCGCG
TCGGGCGATG CGCCGCAATC GTGGCTGCTC GACCTCGTGC GCCGCACGCG CCTGATCCAT
CAGCTGCTGG TGCCGGCCGG CTGGTTCTTC GCGAAGGCCG CGCGGATTCC GCTGCGCCTG
CCGCTGTCGG GCGCGATGCG CTTCACGCTG CCGAAAGTCG AGAAGAAGGC GTCGCGCACG
GTCGATATCG CATGGTCGGG CTTCGTGCTG ATCTGCACGG CCTATATCGT GTGGCGCGTC
GTCAGCTTCG TCGCGACCGG CGTGACGATG GCCGACGTCG GCCACGTGCT GGTGCTCGGG
CTCATCACGC TGCTGCGCGT GGTCGTGCTG ATCACGATCG CGTCCGTGAT CTGGGTGCCG
ATCGGCGTGC TGATCGGGCT GCGTCCGCGG CTCGCGGAGA AACTGCAGCC GCTCGCGCAG
TTCCTCGCCG CGTTCCCGGC CAACCTGCTG TTCCCGGTGT TCGTGATCGT GATCGCGCGC
TTCCACCTGA ACCCCGACAT CTGGCTGTCG CCGCTGATCG TGCTCGGTAC GCAGTGGTAT
ATCCTGTTCA ACGTGATCGC CGGCGCGACG TCCTATCCGA ACGACTATCG CGAAGCGGCG
ACGAACTTCC GGATCCGCGG CTGGCAGTGG TGGCGCCAGG CGATCCTGCC CGGCATCTTC
CCGTACTACG TGACCGGCGC GATCACCGCG TCGGGCGGCG CGTGGAACGC GAGCATCGTG
TCGGAAGCGG TGCAGTGGGG CACGACCAAG ATCGAGGCGC ACGGCCTCGG CGCGTATATC
GCGCAGACCA CCGCCGCCGG CGACTTTCCG AAGATCATCC TGGGCATCGC CGTGATGTCC
CTGTTCGTTA CCCTGTTCAA CCGCCTGCTG TGGCGCCCGC TGTATGCCTT CGCCGAAGCG
AAGCTGCGGC TCGACTGA
 
Protein sequence
MDVGFFNPNR TANASAWRVL PNRWDFIAFP LIICLIAMAV VGFHETMAPI GTLQTQKISL 
DPSNLPEYAL RTTLRMLAAM VASLAFTLIY GTLAAKSRRA GMVLIPILDI LQSVPVLGFI
SFTVTFFLAL FPSRVLGAEL AAIFAIFTSQ AWNMTFSFYQ SLRTVPRDLD EVSRGFHLTS
WQRFWKLEVP FSMPGLIWNM MMSMSGGWFF VVASEAITVG NQTITLPGIG AYLAQAISDK
NFGAIGWVIL TMTVVILAYD QFLFRPLIAW ADKFRMENTA SGDAPQSWLL DLVRRTRLIH
QLLVPAGWFF AKAARIPLRL PLSGAMRFTL PKVEKKASRT VDIAWSGFVL ICTAYIVWRV
VSFVATGVTM ADVGHVLVLG LITLLRVVVL ITIASVIWVP IGVLIGLRPR LAEKLQPLAQ
FLAAFPANLL FPVFVIVIAR FHLNPDIWLS PLIVLGTQWY ILFNVIAGAT SYPNDYREAA
TNFRIRGWQW WRQAILPGIF PYYVTGAITA SGGAWNASIV SEAVQWGTTK IEAHGLGAYI
AQTTAAGDFP KIILGIAVMS LFVTLFNRLL WRPLYAFAEA KLRLD