Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2443 |
Symbol | |
ID | 4308830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2690345 |
End bp | 2692102 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638150280 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_774333 |
Protein GI | 115352494 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.343058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGTCG GATTCTTCAA TCCGAACCGG ACCGCCAACG CGTCCGCGTG GCGCGTTCTG CCGAACCGGT GGGACTTCAT CGCATTCCCG CTGATCATCT GCCTGATCGC GATGGCGGTC GTCGGCTTTC ATGAAACGAT GGCGCCGATC GGGACCCTTC AGACCCAGAA GATCTCGCTC GATCCGTCGA ACCTGCCCGA ATACGCGTTG CGCACGACGC TGCGGATGCT TGCCGCGATG GTCGCGTCGC TCGCGTTCAC GCTGATCTAC GGCACGCTCG CCGCGAAAAG CCGCCGCGCG GGGATGGTGC TGATCCCGAT CCTCGACATC CTGCAGTCGG TGCCGGTGCT CGGCTTCATC TCGTTTACGG TCACGTTCTT CCTCGCGCTG TTCCCGAGCC GCGTGCTCGG CGCGGAGCTC GCGGCGATCT TCGCGATCTT CACGAGCCAG GCGTGGAACA TGACGTTCAG CTTCTACCAG TCGCTGCGCA CGGTCCCGCG CGATCTCGAC GAAGTGTCGC GCGGCTTCCA CCTGACGTCG TGGCAGCGCT TCTGGAAGCT CGAGGTGCCG TTCTCGATGC CCGGGCTGAT CTGGAACATG ATGATGTCGA TGTCGGGCGG CTGGTTCTTC GTCGTCGCAT CGGAGGCCAT TACCGTCGGC AACCAGACGA TCACGCTGCC GGGGATCGGC GCGTATCTCG CGCAGGCGAT CTCGGACAAG AACTTCGGCG CGATCGGCTG GGTCATCCTC ACGATGACGG TCGTGATCCT CGCGTACGAC CAGTTCCTGT TCCGCCCGCT GATCGCGTGG GCCGACAAGT TCCGGATGGA GAACACCGCG TCGGGCGATG CGCCGCAATC GTGGCTGCTC GACCTCGTGC GCCGCACGCG CCTGATCCAT CAGCTGCTGG TGCCGGCCGG CTGGTTCTTC GCGAAGGCCG CGCGGATTCC GCTGCGCCTG CCGCTGTCGG GCGCGATGCG CTTCACGCTG CCGAAAGTCG AGAAGAAGGC GTCGCGCACG GTCGATATCG CATGGTCGGG CTTCGTGCTG ATCTGCACGG CCTATATCGT GTGGCGCGTC GTCAGCTTCG TCGCGACCGG CGTGACGATG GCCGACGTCG GCCACGTGCT GGTGCTCGGG CTCATCACGC TGCTGCGCGT GGTCGTGCTG ATCACGATCG CGTCCGTGAT CTGGGTGCCG ATCGGCGTGC TGATCGGGCT GCGTCCGCGG CTCGCGGAGA AACTGCAGCC GCTCGCGCAG TTCCTCGCCG CGTTCCCGGC CAACCTGCTG TTCCCGGTGT TCGTGATCGT GATCGCGCGC TTCCACCTGA ACCCCGACAT CTGGCTGTCG CCGCTGATCG TGCTCGGTAC GCAGTGGTAT ATCCTGTTCA ACGTGATCGC CGGCGCGACG TCCTATCCGA ACGACTATCG CGAAGCGGCG ACGAACTTCC GGATCCGCGG CTGGCAGTGG TGGCGCCAGG CGATCCTGCC CGGCATCTTC CCGTACTACG TGACCGGCGC GATCACCGCG TCGGGCGGCG CGTGGAACGC GAGCATCGTG TCGGAAGCGG TGCAGTGGGG CACGACCAAG ATCGAGGCGC ACGGCCTCGG CGCGTATATC GCGCAGACCA CCGCCGCCGG CGACTTTCCG AAGATCATCC TGGGCATCGC CGTGATGTCC CTGTTCGTTA CCCTGTTCAA CCGCCTGCTG TGGCGCCCGC TGTATGCCTT CGCCGAAGCG AAGCTGCGGC TCGACTGA
|
Protein sequence | MDVGFFNPNR TANASAWRVL PNRWDFIAFP LIICLIAMAV VGFHETMAPI GTLQTQKISL DPSNLPEYAL RTTLRMLAAM VASLAFTLIY GTLAAKSRRA GMVLIPILDI LQSVPVLGFI SFTVTFFLAL FPSRVLGAEL AAIFAIFTSQ AWNMTFSFYQ SLRTVPRDLD EVSRGFHLTS WQRFWKLEVP FSMPGLIWNM MMSMSGGWFF VVASEAITVG NQTITLPGIG AYLAQAISDK NFGAIGWVIL TMTVVILAYD QFLFRPLIAW ADKFRMENTA SGDAPQSWLL DLVRRTRLIH QLLVPAGWFF AKAARIPLRL PLSGAMRFTL PKVEKKASRT VDIAWSGFVL ICTAYIVWRV VSFVATGVTM ADVGHVLVLG LITLLRVVVL ITIASVIWVP IGVLIGLRPR LAEKLQPLAQ FLAAFPANLL FPVFVIVIAR FHLNPDIWLS PLIVLGTQWY ILFNVIAGAT SYPNDYREAA TNFRIRGWQW WRQAILPGIF PYYVTGAITA SGGAWNASIV SEAVQWGTTK IEAHGLGAYI AQTTAAGDFP KIILGIAVMS LFVTLFNRLL WRPLYAFAEA KLRLD
|
| |