Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2349 |
Symbol | |
ID | 4309330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2586129 |
End bp | 2587409 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150183 |
Product | O-antigen polymerase |
Protein accession | YP_774239 |
Protein GI | 115352400 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCGT TTTCCGCTCC CGCCACGCGG CGCCTGACCG CCGCCCGCGC CTTCGCCGTC ATCGCGCTCT GCATGGTGCC CGTCTCGACC GCGCTGACCA ACGTGTTCTG CGGGCTGTTC GCGGCCGCGC TCGTGATCTC CCCCGAATTC TGGCGCGACC TGCGCTCGTT CGTCACCGAC CCGGCGTCGC TCTCCGCGCT CCTCATCCTC GCGGCGCTGA CCGCGAGCAT CACCTATACC GTCGCGCCGC ACCCGAAGGC GTGGAACTGG ATCGGCAAGT ACGACAAGCT GCTGCTGCTG CCGTTTGCGG TGCTCGCGTT CCGCCATTCG AACTGGGCGC CGATCGTGCG GCGCGCGTGG TTCGGCACGC TGTGCGTGAT CCTGTTGCTG TCGACCACCA ACTATCTCGG CCTGACCGCG ATCGGGCCCG CGCATGCGAG CGACCTGCCG CTGTCGCGCG CGTGGGTGTT CAAGAACCAC ATCGCGGCCG GCATGTTCGG CGCGCTGCTG TTCTATCAGG CCGCCGACCT CGCGCTGTCG GCCCGCACCG CGCTGTCGCG CGCCGCGTAT GGCGCCGTCG CCGCCTGGTC GTTGATCAAC GTGTTCGTGA TGCTGCAGGG GCGCACCGGG CAGGTCATCG CGCTGCTGCT GATCCTCGTC GTCGCGGTGC GTTTCGTGTT GCTGCTGCGC CGCCAGTCGG CGTTGCGCGC CACCCTCGCC GCCGGAACGC TGGTGCTGGC CGGCGTCGCG CTGGTCGCTG CCGCGTGCAC GATGCACAAC GGCCGCCTCG TGAAGGTCGT GACGGAAGTG CAGCAGTATC GGCAGACCGA TGCGGCCACG TCGACCGGGC TGCGTCTCGA GTGGTACAAG AAGGGGCTCG AGCTGTATCG CATGCGCCCC GTGATCGGCT ACGGCGCGGG CGGTCTCGAG TTCGAGTTCG AGAAGCTCAC GGCGGGCAAG ACGGCCGCCG AAGGCCAGCT CACGTCGAAC CCGCATAACG AATATCTGCT GATGGCCGTG CAGCTCGGCA CGCTCGGGGT CCTGCTGTTC GTGAACCTGA TCGTGCAGAT CGCGCGCGGC AGCCGCGCGC TCGACCCGCG TTCGCAGCAC CTGCTGCTCG GATGGCTCGC GATCTTCGCG ATCGGCAGCC TCGCGAATTC GCTGCTGCTC GATTTCGCCG AAGGCCACCT GCTGGTGCTG CTCGCGGGCA TCCTGCTCGG CTGCGCCGAG CGCGGCGAAG CGCTGCCGCG CGAGACGTCG GCGATCCGGC GCAGCGCGTA A
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Protein sequence | MLSFSAPATR RLTAARAFAV IALCMVPVST ALTNVFCGLF AAALVISPEF WRDLRSFVTD PASLSALLIL AALTASITYT VAPHPKAWNW IGKYDKLLLL PFAVLAFRHS NWAPIVRRAW FGTLCVILLL STTNYLGLTA IGPAHASDLP LSRAWVFKNH IAAGMFGALL FYQAADLALS ARTALSRAAY GAVAAWSLIN VFVMLQGRTG QVIALLLILV VAVRFVLLLR RQSALRATLA AGTLVLAGVA LVAAACTMHN GRLVKVVTEV QQYRQTDAAT STGLRLEWYK KGLELYRMRP VIGYGAGGLE FEFEKLTAGK TAAEGQLTSN PHNEYLLMAV QLGTLGVLLF VNLIVQIARG SRALDPRSQH LLLGWLAIFA IGSLANSLLL DFAEGHLLVL LAGILLGCAE RGEALPRETS AIRRSA
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