Gene Bamb_2314 details

Gene Information

• Locus tag: Bamb_2314
• ID: 4309111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2549149
• End bp: 2551086
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638150148
• Product: glycosyltransferase
• Protein accession: YP_774204
• Protein GI: 115352365
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCCGG ACCGGCTTGA CCCGACCGAG ATCTTTTCCA TGCCCGGAAC CGCAGCACCC 
GGCCGGCGAC GCACGTCCTC CGTGCCCGCT TCGGCCACGC ACGCCCGATC AGCCGCCGAT 
CCCGCCCCCA ACGCGACGCT CAATGCCGCC GGCACGCCCG CCGTGGCAGG CGCCACCGCG 
ACGAAGGGCC CCGGCGATCG CGTGCTGCGG CTCGGCTGGC GCGTCTGGCT GCTGGTCGCC 
GCGCTGGTCT GCGCGTATAC GCTGCCGGGC GTGCTCGGCC ACGATCCGTG GAAGCAGGAC 
GAAACCTATA CGTTCGGCAT CATCCAGCAC ATGCTCGAGA CGGGCGACTT CGTCGTGCCC 
ACCAACGCCG GCCTGCCCTT CATGGAAAAG CCGCCGCTCT ACGCGTGGGT CGCGACGAGC 
CTCGCGTGGC TGCTGCAGCG CGTGATGCCG CTGCACGACG CGGCACGGCT CGCGAGCGCG 
CTGTTCGCCG CGCTTGCGTT CGGCTTCATC GCACGCGCGG CACGCAGTGC CAGCCGCGCC 
CACGGCTGGC TCGACCTGCG CGTGATCGGC CCCGTCGTGC TGAGCGCGGG CACGCTCGTC 
GTCATCAAGC ACGTTCACGA CATGATGACG GACGTCGCGC TGTTCGCCGG CACCGCGATG 
GCCTTCTGCG GCCTGCTCGA GCTCGTGATG CAGCACGTCG CGCGTGCGCA GCAGATGCGG 
CATGCGCTGC CGATGCAGCC GTCGGGCCGC TGGGCCGCGC CGATGTTCGG CGCGGGCGTC 
GGCATCGCGC TGATGGCGAA GGGGCTGTTC GTGCCGCTCG TGTTCGCCGC CACGCTCATG 
GGCGCGCTGG TGCTCTACCC GGCCTGCCGC ACGCGCGCGT TCGCGCGCTC GCTCGCGGTC 
GCCGCGCTCG TGTTCGCACC GTTCGCGCTG ATCTGGCCGA TCGCGCTGTT CCTGCGCTCC 
GAGACGCTGT TCATGACCTG GTTCTGGGAC AACAACGTCG GCCGCTTCTT CGGCTTCTCC 
GTGCCGGAGC TCGGCGCGGA AAACGACAAG CCGTTCTTCA TCCTGCGTGC GTTCCTGCTC 
GTCGGCTTCC CGGTCGCACC GCTCGCGATC GTCGCGCTGG CGCGCGGCGC ATGGCGTGAC 
TGGCACGCGC CGCGCGTCGC GCTGCCCGTG CTGTTCGCCG GCATCGGCCT CGCGGTGCTG 
CAAGTGTCCG CGACCTCGCG TCAGCTCTAC ATCCTGCCGT TCTTCGCGCC GCTCGCGCTG 
ATCGCCGCGC AGGCGATCGA ACGCCTGCCG CGCGGGCTGC ATCTCGCGTG GGATTATCTG 
AGCCGCCTGC TGTTCGGTAG CGCCGTCGCG CTCGCATGGG TGATCTGGGC GGTGATGGCC 
GATCCGCGCG CATCGCGGGC GAGCCTCGCC CCGCTCGGCC GCTGGCTGCC GCTCGACTGG 
ACGATGCCGA TCGTGCCCGG GTTCGTGATC GGCGCGCTGG TGCTGACCGT CGGCTGGCTG 
TCGCTGCTGC CGAAGCTGCG CACGACCGGC CCGTGGCGCG GCGCGCTGTC GTGGGGCGCG 
GGCGCGCTGG TGGCGTGGGG CCTCGTGTAT ACGCTGCTGC TGCCGTGGCT CGACGTCGCG 
AAGAGCTACC GGTCGGTATT CGACGACCTG GACGCGCATC TCGCGCTCGA ATGGCGCGAC 
GACGACTGCA TGGCAAGCCT GCACGGGCTC GGCGAGTCGG AAGCGCCGAT GCTGTACTAC 
TTCTCCGGGA TCCAGCACAC GCCGATCGAC GACGCGAAGA CGACGCGCTG CACGTGGATG 
ATCGTCCAGG GCGTGCGGGC CGTCGATCCG GCGCCGGGCA GCGAATGGAA ACTGTTCTGG 
AGCGGCGCGC GCCCGGGCGA CAACGCGGAA CTGCTGCGCG TCTACGTGCG CACGCCTGAA 
GCACACGACG CGCCGTGA 

 

Protein sequence

MSPDRLDPTE IFSMPGTAAP GRRRTSSVPA SATHARSAAD PAPNATLNAA GTPAVAGATA 
TKGPGDRVLR LGWRVWLLVA ALVCAYTLPG VLGHDPWKQD ETYTFGIIQH MLETGDFVVP 
TNAGLPFMEK PPLYAWVATS LAWLLQRVMP LHDAARLASA LFAALAFGFI ARAARSASRA 
HGWLDLRVIG PVVLSAGTLV VIKHVHDMMT DVALFAGTAM AFCGLLELVM QHVARAQQMR 
HALPMQPSGR WAAPMFGAGV GIALMAKGLF VPLVFAATLM GALVLYPACR TRAFARSLAV 
AALVFAPFAL IWPIALFLRS ETLFMTWFWD NNVGRFFGFS VPELGAENDK PFFILRAFLL 
VGFPVAPLAI VALARGAWRD WHAPRVALPV LFAGIGLAVL QVSATSRQLY ILPFFAPLAL 
IAAQAIERLP RGLHLAWDYL SRLLFGSAVA LAWVIWAVMA DPRASRASLA PLGRWLPLDW 
TMPIVPGFVI GALVLTVGWL SLLPKLRTTG PWRGALSWGA GALVAWGLVY TLLLPWLDVA 
KSYRSVFDDL DAHLALEWRD DDCMASLHGL GESEAPMLYY FSGIQHTPID DAKTTRCTWM 
IVQGVRAVDP APGSEWKLFW SGARPGDNAE LLRVYVRTPE AHDAP