| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2064 |
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| Symbol | |
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| ID | 4311637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2264973 |
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| End bp | 2266112 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149881 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_773954 |
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| Protein GI | 115352115 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CCCTAGCCCT TACCGAACAG CTGATCGCCC GCGCGTCCGT CACGCCCGAC
GACCAGCATT GCCAGCAGCT CATGACCGAG CGCCTCGCCG CGCTCGGCTT CGAATGCGAG
ACCATCGCGT CGCACGGCGT GACCAACCTG TGGGCCGTCA AGCGCGGCGC CGACGGCCGC
GACGGCAAGC TGCTCGCGTT CGCGGGCCAC ACCGACGTCG TGCCGACCGG CCCGCTCGAG
CAGTGGACCT CGCCGCCGTT CGTCCCCACG CATCGCGACG GCAAGCTGTA CGGCCGCGGC
GCGGCCGACA TGAAGACGTC GCTCGCGGCG TTCGTCGTCG CGTCCGAGGA ATTCGTCGCG
GCCCACCCCG GCCACCGCGG CGCGATCGCG TTCCTGATCA CGAGCGACGA GGAAGGCCCG
GCCACCGACG GCACCGTGAA GGTCGTCGAA CTGCTCGAAA CGCGCGGCGA ACGCGTCGAC
TACTGCATCG TCGGCGAGCC GACCTCGAGC GCGGAGCTCG GCGACGTCGT GAAGAACGGC
CGCCGCGGCT CGATGTCGGG CGAGCTGGTC GTCAAGGGCG TGCAGGGCCA CATCGCATAC
CCGCACCTCG CGAAGAACCC GATCCACCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC
GAACAGTGGG ACGCAGGCAA CGAATACTTC CCGCCGACCA CCTGGCAGGT GTCGAACCTG
CATGCCGGCA CCGGCGCGAC CAACGTGATC CCCGGCCATG CGGACCTGAT GTTCAACTTC
CGCTTTTCGA CGGCGAGCAC GGTCGAGGGC CTGCAGGCAC GCGTGCATGC GATCCTCGGC
AAGCACGGCC TCGAATACAC GCTGAAGTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG
CGCGGCGACC TGTCGAACGC GCTGGAGAAC GCGATCCGCG CCGAGACCGG CCTCACGACC
GAGCTGTCGA CGACGGGCGG CACGTCCGAC GGACGCTTCA TCGCGCGCAT CTGCCCGCAG
GTGATCGAGT TCGGCCCGCC GAACGGCAGC ATCCACAAGA TCGACGAGCA CATCGACGTG
CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGACGCGTGC TCGAACAACT GATCGCCTGA
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| Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQLMTE RLAALGFECE TIASHGVTNL WAVKRGADGR
DGKLLAFAGH TDVVPTGPLE QWTSPPFVPT HRDGKLYGRG AADMKTSLAA FVVASEEFVA
AHPGHRGAIA FLITSDEEGP ATDGTVKVVE LLETRGERVD YCIVGEPTSS AELGDVVKNG
RRGSMSGELV VKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDAGNEYF PPTTWQVSNL
HAGTGATNVI PGHADLMFNF RFSTASTVEG LQARVHAILG KHGLEYTLKW SVSGLPFLTP
RGDLSNALEN AIRAETGLTT ELSTTGGTSD GRFIARICPQ VIEFGPPNGS IHKIDEHIDV
RFVDPLKNVY RRVLEQLIA
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