Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2056 |
Symbol | |
ID | 4311629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2253468 |
End bp | 2254001 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638149873 |
Product | peptide deformylase |
Protein accession | YP_773946 |
Protein GI | 115352107 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.302964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCG AGATCCTGAA GATGGGCGAT CCGCGCCTGC TCGAAGTCGC CAAGCCGGTC GCGCAGTTCG ACACGCCGGA GCTGCACGAG ATCGTCGCGG ACATGTTCGA GACGATGCAT CACGCGAACG GCGCGGGCCT CGCCGCGCCG CAGATCGGCA TCGGGCTGCA GCTCATTATC TTCGGCTTCG GCAGCAACAA CCGCTATCCG GACGCGCCGC CCGTGCCCGA GACCGTGCTG ATCAACCCGA AGCTCGAGTA CATGCCGCCG GACATGGAAG AGGGATGGGA AGGCTGCCTG TCGGTGCCGG GCATGCGCGG CGTCGTCAGC CGCTATGCGA AGGTGCGCTA CAGCGGTTAC GACCAGTTCG GCGCGAAGAT CGACCGCGTC GCGGAAGGCT TCCACGCGCG GGTCGTCCAG CACGAATACG ACCACCTGAT CGGCAAGCTG TATCCGATGC GGATCACCGA CTTTACGCGC TTCGGCTTCA CCGAGGTGCT GTTCCCGGGG CTCGATCCGA CCGACGACGA CTGA
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Protein sequence | MIREILKMGD PRLLEVAKPV AQFDTPELHE IVADMFETMH HANGAGLAAP QIGIGLQLII FGFGSNNRYP DAPPVPETVL INPKLEYMPP DMEEGWEGCL SVPGMRGVVS RYAKVRYSGY DQFGAKIDRV AEGFHARVVQ HEYDHLIGKL YPMRITDFTR FGFTEVLFPG LDPTDDD
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