Gene Bamb_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2018 
Symbol 
ID4309060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2212885 
End bp2213271 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID638149835 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_773908 
Protein GI115352069 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCTC ACGTTCATTG CACCGATGCA GGCGATACCG CCTTGCCGCC GAAAGCATCC 
ATTCCTTATC CGGGTACGGA TGGGTACGAA GACCTTCCGC AGTTTTCGGC CAAACTTCCC
CTCCCCTTCC GCCGCACCAT TCGCCGCCAA GATTTGCACC AGATCGTCCC TTTGGCGGAC
ACGACGATCT ATGGAATGGA GCAACGTGGC GAGTTTCCAC GCCGATTCAA TCTGACCTCG
CGCTGCGTTG TCTGGGATCT GGAGGAAGTC GAAGCTTGGA TCGAAGCTCG CAAGCAGTCC
TCTCGATCCG GTGCTATCAC CAGGTCCAAC GGACCTGATG TCAGGCTACG TAAGCGCCGA
CCCGTGCGCG ATGTAGCTTC GACGTAG
 
Protein sequence
MPAHVHCTDA GDTALPPKAS IPYPGTDGYE DLPQFSAKLP LPFRRTIRRQ DLHQIVPLAD 
TTIYGMEQRG EFPRRFNLTS RCVVWDLEEV EAWIEARKQS SRSGAITRSN GPDVRLRKRR
PVRDVAST