| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2008 |
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| Symbol | |
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| ID | 4309050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2204798 |
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| End bp | 2205535 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638149825 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_773898 |
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| Protein GI | 115352059 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.589557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC GTGTGCTTTC CGCTTCGCTC GCCGCCGCGC TGGCCGGCTC GCTGATGCTC
GCTCAGCCGG CGGCGGCGCT GACCTTCGTT GATCCCGTCA ACTTGGTGCA GAACACGCTG
ACCGCCATCC GCACCCTTGA GCAGATCAAC AATCAGATCA ATCAGCTTCA GAACGAAGCG
CAGATGTTGA TGAACCAGGC GCGCAACTTG GCGAATCTCG ATTTCAACAT CGTCAACCGC
CTGCGCTCCA CGCTCGCCAG CACCGAACGC CTGATCGTCG AGGCGCAGGG ACTGGCCTAC
GACGTGCAGA GCATGGATGC CACGTTCGCC CGTCTGTACC CGGAGCAGTA CGCCGCGACC
ATCAGCGGCG ACCGCATGGC GCAGGACGCC CGCGAACGCT GGAAGAACAC GCTCGATGGC
CTGCATACCG CGATGCGGAT GCAGGCACAG GTGTCGCAGA ACCTGGCACA AGACGAAAGC
GCACTGGCCG ATCTGGTCAG CCAGAGCCAG TCCGCCACCG GCGCCTTGCA GGCGCAGCAG
GCGACCAACC AGCTTCTTGC CTTGCAGGCC AAGCAGTCCA TCCAGTCCCA GCAACTCCAG
ATCACGCAAG ACCGCGCGGC CTCGCTGGAA CTGGCGCGGC AGGCGGCGGC CACCGAGCGC
GCCCGCGAAG TGCGGCGGCG CTTCCTTCGC AGCGGCACGC CGTACACGCC GCAGTCCATC
AATTTCTACA ACAACTGA
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| Protein sequence | MKIRVLSASL AAALAGSLML AQPAAALTFV DPVNLVQNTL TAIRTLEQIN NQINQLQNEA
QMLMNQARNL ANLDFNIVNR LRSTLASTER LIVEAQGLAY DVQSMDATFA RLYPEQYAAT
ISGDRMAQDA RERWKNTLDG LHTAMRMQAQ VSQNLAQDES ALADLVSQSQ SATGALQAQQ
ATNQLLALQA KQSIQSQQLQ ITQDRAASLE LARQAAATER AREVRRRFLR SGTPYTPQSI
NFYNN
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