| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1989 |
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| Symbol | |
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| ID | 4311755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2185032 |
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| End bp | 2187035 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149806 |
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| Product | hypothetical protein |
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| Protein accession | YP_773879 |
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| Protein GI | 115352040 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.156539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC GCCGCGACGA CGATTTCCGG GTGCGCCCCA GCGCCCCGAA GAACCGGGGT
AAAGGCCAGG GCCAGAGCTT CGCTTCCAAG GTGCTCAAGC AGGCTGGCAA GGCCAGCGGC
GGCAAGTCCT CGATACGCCA TTCCGTAGCC GGTGGCAGCG GCGCACGCGC TGGCCAGCGT
CCCGGCTCGC GCCTGGGGCG CGGCCATACG GCGGCGCGCT TCGCCGGGGC GAAGCTGACG
CCCATGTCTC GGCGCGTCAC GATCAAGACC CTGCTGGTCA ATCAACGCAA TGCCAGCCCG
CAATCGCTCG CCAAGCATCT GCGCTACATC GAGCGCGACG GCGCCAGCCG CGATGGCGAA
CCTGGGCGGG CCTACGGGCC CCAGACCGAC GAAGCCGACC TTGACGCTTT CAAGGAGAGG
GCCGCCGACG ACCGGCATCA TTTCCGCTTC ATCGTCTCAC CGGAAGACGG CGCCGAGCTG
GACGACCTGC GCACCTATAC CCGGCATCTG GTGAACCGGA TGGAAGCCGA CTTGGGGACG
CGGCTGGATT GGGTGGCGGT CGATCACTGG AACACCGACA ACCCGCATAC GCACCTCATC
GTGCGCGGGC GCGACGACAC CGGCAAAGAT CTCATCATCG CGGGCGACTA CATCGCCCAC
GGCTTTCGCC ATCGCGCCGC CGAACTGGCG ACGGAATGGC TGGGGCCACG CACCGAACTG
GAGATCCAGC AGACCTTGCA GCGCGAGGTG GAGCAAGAGC GGTGGACGAG CCTCGACCGC
ACCCTGCAAC GAGAGGCCGG CGAGGATGGC CGGGTGCAGA TCGAACGCTT CAATGAACCC
CGGCTGCAAC GCCAGCGCCT GCTGCTGATC GGTCGCCTTC AACGCTTGCA GCGCCTGGGC
CTGGCTGACG AGATGGAGCC GGGCGCCTGG GCCGTCCACG CAGATGTCGA GAAGACCTTG
CGCGCTCTGG GCGAGCGTGG CGACATCATC CGCACCATGC AGCGGGCCAT GAGCGGCCGG
CCGCGTGAGC TGGCGGTGTT CGAACCGGGC CAAGATGCAG ATGGAAGCGG CCGCAGCATC
GTCGGTCGCG TGGCTGCCAA GGGGCTGGCC GACGAGCTGC ACGACCGGGG TTATCTGGTC
ATCGACGGCG TGGACGGCAA GGCCCACTAC GTTGCGCTCA ACGCCCGCGA CGAGTTGGCG
AACTATCCCA CCGGAGCCGT GGTGGAGGTA CGCGGCTCCG CCGAGGTGCG GGCGGCCGAC
AAGAACATCG CCGCGCTGAC CAGCGATGGC CTGTACCGCA CCGATCATCA CCTGGCGATC
GAGCAAGGCC GAGCAAAGCC CGGACGTGAC CCGCAGGAAG TGGTCGCCGC CCATGTTCGG
CGGCTGGAAG CCCTGCGGCG GGCTGGCATC GTCGAGCGCG TGGCCGAAGG GCTATGGAAG
GTGCCGGACG ACCTGCCCGA GCGTGGCCGC CAGTACGACG CGCAACGACT GGGTGGTGTC
GCCGTGGAGC TGAAATCACC CCTGCCGATC GAGCGGCAGG CGCGGGTGAT CGGCGCGACC
TGGCTGGATC AGCAGCTAAT CAGCGGCGGC AAGGGACTGG GCGACCTGGG CTTTGGCGGG
GAGGCCAAGG ACGCTTTGCT GCAGCGCGCC GACTTCTTGG CCGAACAGGG GTTAGCCGAA
CGACGCGGGC AGCGCGTGAT CCTCGCCCGC AACCTGCTGG CGACGCTGCG CGGGCGCGAT
CTGGCGAAGG CCGCACAGGA CATTGCCGCC GAAACCGGCC TGGAGCATCG GCCTGCCACG
GACGGGCAAC GCTTGGCCGG CATCTACCGG CGCTCCGTCA TGCTGGCGAG CGGGCGCTAC
GCGATGCTTG ATGACGGCAT GGGATTCAGC CTGGTGCCGT GGCACCCGGT GATCGAGCAG
CGGCTGGGGC AGCAGCTTGC CGCCACGGTG CGCGGCGGCG GTGTGTCTTG GGAGATTGGG
CGGCAACGTG GCCCGTCTAT CTGA
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| Protein sequence | MTDRRDDDFR VRPSAPKNRG KGQGQSFASK VLKQAGKASG GKSSIRHSVA GGSGARAGQR
PGSRLGRGHT AARFAGAKLT PMSRRVTIKT LLVNQRNASP QSLAKHLRYI ERDGASRDGE
PGRAYGPQTD EADLDAFKER AADDRHHFRF IVSPEDGAEL DDLRTYTRHL VNRMEADLGT
RLDWVAVDHW NTDNPHTHLI VRGRDDTGKD LIIAGDYIAH GFRHRAAELA TEWLGPRTEL
EIQQTLQREV EQERWTSLDR TLQREAGEDG RVQIERFNEP RLQRQRLLLI GRLQRLQRLG
LADEMEPGAW AVHADVEKTL RALGERGDII RTMQRAMSGR PRELAVFEPG QDADGSGRSI
VGRVAAKGLA DELHDRGYLV IDGVDGKAHY VALNARDELA NYPTGAVVEV RGSAEVRAAD
KNIAALTSDG LYRTDHHLAI EQGRAKPGRD PQEVVAAHVR RLEALRRAGI VERVAEGLWK
VPDDLPERGR QYDAQRLGGV AVELKSPLPI ERQARVIGAT WLDQQLISGG KGLGDLGFGG
EAKDALLQRA DFLAEQGLAE RRGQRVILAR NLLATLRGRD LAKAAQDIAA ETGLEHRPAT
DGQRLAGIYR RSVMLASGRY AMLDDGMGFS LVPWHPVIEQ RLGQQLAATV RGGGVSWEIG
RQRGPSI
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