| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1981 |
|---|
| Symbol | |
|---|
| ID | 4311747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2177741 |
|---|
| End bp | 2178082 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638149798 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_773871 |
|---|
| Protein GI | 115352032 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.893861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AGTGGACTGA AGAACTGAAG TCACTGGTCA AGCGGGTCAG TGGTTTCAAC
AAGACGAATG CGCCGGTGGC TAGGGCATTC CACGCTTTGG AGACTGCCAC GCGAGAGGGC
AGTGTGCTTG ACGCGAAGAC GCATGAGCTG ATTTCCCTGG CGGTGGCGGT AACGACCCGC
TGCGATGGCT GCATCGCGGC GCACGCTGGC GCAGCCAAAA AGGCCGGGGC GACCAAGGAA
GAAATCGCCG CCGCCCTGGG CACAGCTATC GCGCTCAATG CCGGAGCTGC ATACGTCTAT
TCTTCGCGAG CCTTGGAAGC CTACGAAGAA CTCGGTGCCT AA
|
|---|
| Protein sequence | MEKKWTEELK SLVKRVSGFN KTNAPVARAF HALETATREG SVLDAKTHEL ISLAVAVTTR
CDGCIAAHAG AAKKAGATKE EIAAALGTAI ALNAGAAYVY SSRALEAYEE LGA
|
|---|
| |