Gene Bamb_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1974 
Symbol 
ID4311740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2172099 
End bp2173538 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content62% 
IMG OID638149791 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_773864 
Protein GI115352025 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGTA TGAAGGTTGA TGTGGCGATC ATTGGCGCTG GCAGCGCCGG CATGACCGCC 
TACCGTGCAG CCAAGGCTCA CACTGACAGC GTGGTTGTCA TTGAGGGTGG CGTCTACGGC
ACCACGTGCG CTCGGGTTGG TTGCATGCCG AGCAAACTAC TGATCAGCGC CGCCAATGCC
GCCCACGCGT TGAAGATGGC ACCGAGCTTC GGTGTCAATC CGGGCATGAT CGAGGTCAAT
GGCCGGAAAG TAATGCATCG GGTTCGCAGC GAACGGGACC GCTTCGTGGG TTTCGTCGTG
GAAACGGTCG AGGGTTGGCC GGAAGCGCAT CGCTTGCGTG GCACGGCAAA GTTCCTGTCG
CCCCACGAAC TACTTGTGGG ATCTACGATT GTCGAGGCTG ATCGCATTGT CGTTGCCACC
GGTTCCAGTC CCTATGTTCC TGAGGGCTGG CATGAAGCCT TGGGCGACAG GCAGCTGATC
AACGACGACG TTTTCGACTG GGCCGATCTG CCCGGCTCGG TGGCTGTCGT CGGAACCGGA
GTTATCGGAC TTGAGTTGGG ACAGGCGTTG CATCGACTGG GCGTGAGAGT GCGCCTGTAC
GGCCGCAGTC GATCTATCGG CCCGCTGACC GACCCTGCGG TTGCGGCGGA GGCTACCCGC
ATTTTTTCCG ATGAGGTTCC TGTGAGCCTG GGGGCCACGA TTTCGCCCAA GCTGACTACA
GATAGGCGCG TATCGATCAC GTCAATCGAT GAGCACGGTG TTCATTCGAC CGAAATCTAC
GACTACCTGA TCGTTGCGAC AGGTCGCCGG CCAAATACGT CCGGGCTTGA TCTGGAACTT
GCTGGCGTTA GGCTGGACAG TTCCGGCCAG CCTGTGTTCG ATCGTGCCAC CGGGCAGAGC
GCTCCCTCGC ACATTTTCAT AGCCGGCGAC GTCAACGGCA TGACGGAGAT TCTTCACGAA
GCGGCCGACG ATGGCCGTAT CGCAGGTGAC AACGCCGGGC GATTCCCGCT CGTCAGGCCT
CGCCCCCGCA GAGCGCCGCT CGGCATCGTG TTCTCAGATC CGCAGATCGC GATGATCGGG
TCCACATTCC AGCAGTTGAC GGCGAGCGGC GCGGCCTTTG AGATCGGTGA ATCCTCGTTC
GCCGACCAAG GGCGAAGCCG GGTGATGCTG GAGAACCGCG GTATGATTCG CGTTTACGCA
GACACGGCGA CCGGGGTCTT CCTGGGCGCG GAGATGGTGG GGCCAGCTTC CGAACATATC
GGCCACCTGC TGTCGTGGAG CGTCCAGCGG GGCGATACCG TACAGCAAAT GATCGACAGT
CCGTTCTACC ACCCGGTCGT GGAGGAAGGC GTCCGCACCG CGTTGCGACA TCTGCAGCGA
AAGCTTGCCC TTGTACCTCA GGCGCCCGAG AGCTGCCTGG ACTGCGTACC CGGCGCTTGA
 
Protein sequence
MTRMKVDVAI IGAGSAGMTA YRAAKAHTDS VVVIEGGVYG TTCARVGCMP SKLLISAANA 
AHALKMAPSF GVNPGMIEVN GRKVMHRVRS ERDRFVGFVV ETVEGWPEAH RLRGTAKFLS
PHELLVGSTI VEADRIVVAT GSSPYVPEGW HEALGDRQLI NDDVFDWADL PGSVAVVGTG
VIGLELGQAL HRLGVRVRLY GRSRSIGPLT DPAVAAEATR IFSDEVPVSL GATISPKLTT
DRRVSITSID EHGVHSTEIY DYLIVATGRR PNTSGLDLEL AGVRLDSSGQ PVFDRATGQS
APSHIFIAGD VNGMTEILHE AADDGRIAGD NAGRFPLVRP RPRRAPLGIV FSDPQIAMIG
STFQQLTASG AAFEIGESSF ADQGRSRVML ENRGMIRVYA DTATGVFLGA EMVGPASEHI
GHLLSWSVQR GDTVQQMIDS PFYHPVVEEG VRTALRHLQR KLALVPQAPE SCLDCVPGA