| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1953 |
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| Symbol | |
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| ID | 4310191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2149687 |
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| End bp | 2151171 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149770 |
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| Product | permease for cytosine/purines, uracil, thiamine, allantoin |
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| Protein accession | YP_773843 |
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| Protein GI | 115352004 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGT TCAGTGTGGC GCACGACAGC GCGTATCCGG CGGAAGAAGG CGGCGAGGGC
GGCGGTTCCC CGTTGCCGGA TGGTTACAGT CGACGTTTGT ACAACGAAGA TTTGGCACCC
CTAAAGAATC AGACATGGGG TTCGTACAAC ATCTTCGCGT TCTGGATGTC GGACGTGCAC
AGCGTCGGCG GCTACGTGTT CGCGGGCAGC CTGTTCGCGC TCGGGCTGAC GAGCTGGCAG
GTGCTGATCG CACTGATCGT CGGCATCACG ATCGTGAACC GGCTGTGCAA CCTGATCGCG
CGCCCGAGCC AGCAGATCGG CGTGCCGTAT CCGGTCGCGT GCCGTGCGAC GTTCGGCGTG
CTCGGCGCGA ACGTGCCGGC CGTGATCCGC GGGCTGATCG CGATCGCGTG GTACGGCATC
CAGACCTATC TCGCGTCCAG CGCGCTCGTG ATCGTCGTGC TGAAGTTCTT CCCGCAATGG
CTGCCGTACG CGGACGTCCA TCGTTACGGC TTCCTCGGGC TGTCCGCGGT CGGCTGGGCC
GGCTTCATGC TGCTGTGGGT GCTGCAGGCG TTCGTGTTCT GGAACGGGAT GGAGACGATC
AAGAAGTTCA TCGACTTCGC GGGCCCGGCC GTCTACGTCG TGATGTTCAT TCTGGCCGGC
TACATGGTGT GGCGCGCGGG CTGGCGCAAC ATCGGCCTGA ACCTCGGCGG CGTCAAGTAT
CACGGCGCGG AAGTGATTCC GGTGATGATC ACGGCCGTGT CGCTCGTCGT GTCGTACTTC
TCCGGGCCGA TGCTGAACTT CGGCGACTTC TCGCGCTACT GCCGCTCGTT CGGCGACGTG
AAGCGCGGCA ACTTCTGGGG GCTGCCGGTC AACTTCCTCG CGTTCTCGCT CGTCACGGTG
ATCACGACGG CCGCGACGCT GCCGGTGTTC GGCGAACTCA TCACCGACCC CGTCGCGACG
GTCGGCCGCA TCGATCATCC GACCGCGGTG ATCCTCGGCG CGCTGACCTT CACGATCGCG
ACGATCGGGA TCAACATCGT CGCGAACTTC GTGTCGCCCG CGTTCGACTT CTCGAACGTC
GCGCCGCGGC TGATCAGCTG GCGCGCGGGC GGGATGCTCG CCGCCGTCGC GTCGATCTTC
ATCACGCCGT GGAACCTGTT CAACAACCCG GCCGTGATCC ACTACACGCT CGACGTGCTC
GGCGCCTTCA TCGGCCCGCT GTACGGCGTG CTGATCGCCG ACTTCTACCT CGTCAAGCGC
GGCCGCCTCG TGCGCGACGA CCTCTACACG ATGTCGGAGA GCGGCACCTA CTGGTACACG
GGCGGCGTGA ACCGCCGCGC GCTCGCCGCG CTGCTGCCGG CCGCGGTGAT CGCGGTCGTC
TGCGTGATGG CGCCGGGCTG GGAGGCCGCC GCGAACTTCT CGTGGTTCAT CGGCGCGGGG
CTCGGCTTCG TGTTCTACCG GCTGCTCGTC AGCACGACGG CGTGA
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| Protein sequence | MAQFSVAHDS AYPAEEGGEG GGSPLPDGYS RRLYNEDLAP LKNQTWGSYN IFAFWMSDVH
SVGGYVFAGS LFALGLTSWQ VLIALIVGIT IVNRLCNLIA RPSQQIGVPY PVACRATFGV
LGANVPAVIR GLIAIAWYGI QTYLASSALV IVVLKFFPQW LPYADVHRYG FLGLSAVGWA
GFMLLWVLQA FVFWNGMETI KKFIDFAGPA VYVVMFILAG YMVWRAGWRN IGLNLGGVKY
HGAEVIPVMI TAVSLVVSYF SGPMLNFGDF SRYCRSFGDV KRGNFWGLPV NFLAFSLVTV
ITTAATLPVF GELITDPVAT VGRIDHPTAV ILGALTFTIA TIGINIVANF VSPAFDFSNV
APRLISWRAG GMLAAVASIF ITPWNLFNNP AVIHYTLDVL GAFIGPLYGV LIADFYLVKR
GRLVRDDLYT MSESGTYWYT GGVNRRALAA LLPAAVIAVV CVMAPGWEAA ANFSWFIGAG
LGFVFYRLLV STTA
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