Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1903 |
Symbol | |
ID | 4310907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2092484 |
End bp | 2093788 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638149717 |
Product | D-amino-acid dehydrogenase |
Protein accession | YP_773793 |
Protein GI | 115351954 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.612686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTCA TCGTCATCGG CGGCGGACTC AGCGGCGTCG CCACCGCCTA CCAATTGCGT GCGGCCGGCC ATCGCGTGTG CGTGGTCGAG CGCCACGCGA CCGTCGCGCA GGGTGCGACC TACGGCGACG GCGGCGCACT GCTGCCGAGC CCGCTCGACG TCTGGTTCGG CCCCACCTTC ATGCACCAGC GCCAGCCGCG CGACACCGGC ATCGTGTACA AGCCGGGCTT GAACGGCGGC GTGCGCCGCT TCGTCAAGCA GCTCGCGGCG CTGCGCGAGC CCGACGCATT CGTCGCGCAG TACGCACGGC TGCGCCCGCT GATCGACGCG TCGCGCGAGT CGCTCGCCGA CATCGAGGCG CGCTTCCAGC TCGAATTCGA GCAGAAACCG GGGATCCTCC ACGTCGTGCG CGACACGCGC GACTGGGACG CGCTGCAGCC GGCGCTCGAC CTGCTGCGCA CGCTCGACCA GCCGTACCGG GTGCTCACCG CCGACGAATG CGCGGCACTC GAGCCGTCGG TGCCGGCCGA GCCCGGCTTC GCCGGCGGCG TGCTGCTCGA GGCCGAGCGC ACCGGCAACT GCCCGCTGTT CGCGAAGCTG GTCAAGCAGA CGCTCGACGA GCACGGCGTG CAGTTTCGCT TCGGCGCGGA CGTCGCCGCG ATCCGCGTCG ACACCGGCCG CGCCGCGGTC GAGCTCGCGC CGCCGGCCGG CGGGCGGCAT GCGACGAAGG CACACGAGGT CGACGTGATT TCGGCCGACG CGATCGTGGT CGCCGCCGGC GCCGGCAGCC TGCCGCTGCT GGAGCGGCTC GGCTGGCGGC TGCCGCTGCA TCCGGTGCGC GCCCACACGC TGACCGCGCC GGTCGCGTAC GAAGAACATG CGCCGCACCT GAGCGTCGTC GATTCGATCA AGCGGATCTC GATCACGCGC ACCCACCAGC GGTTGCGCGT CGGCGGCGGC GGCGTGCTGC AGAGCCTCGC CGACACCGCG AAGCCGCTTC CCGAGCCGTT GTCCGAGGCC GCGCTCGCGC TGCTCGGGCA GGCCGTCCAC GACTGGGTGC CCGGCGCCGC AAAGATTTCC GCCGCGCTGT CGTGGCAAGG CACGCAGCTG CTGTCGCCGG ACGGCCTGCC GGTCGTCGGT CCGACCCCGC ATCCGCGCGT GTTCGTCAAT TTCGGCCACG GCCCGGCCGG CTGGGGCCTC GCGTGCGGGT CTGCTAAAGT GGTGACCGAC TGCGTGGGCG GCGCCGCGCA GCAGTGGCCG GCCGACACGC TCGCCGCGCT GAGCGCCGCG CGCTTCACGA CCTGA
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Protein sequence | MDVIVIGGGL SGVATAYQLR AAGHRVCVVE RHATVAQGAT YGDGGALLPS PLDVWFGPTF MHQRQPRDTG IVYKPGLNGG VRRFVKQLAA LREPDAFVAQ YARLRPLIDA SRESLADIEA RFQLEFEQKP GILHVVRDTR DWDALQPALD LLRTLDQPYR VLTADECAAL EPSVPAEPGF AGGVLLEAER TGNCPLFAKL VKQTLDEHGV QFRFGADVAA IRVDTGRAAV ELAPPAGGRH ATKAHEVDVI SADAIVVAAG AGSLPLLERL GWRLPLHPVR AHTLTAPVAY EEHAPHLSVV DSIKRISITR THQRLRVGGG GVLQSLADTA KPLPEPLSEA ALALLGQAVH DWVPGAAKIS AALSWQGTQL LSPDGLPVVG PTPHPRVFVN FGHGPAGWGL ACGSAKVVTD CVGGAAQQWP ADTLAALSAA RFTT
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