Gene Bamb_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1860 
Symbol 
ID4310081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2041567 
End bp2042736 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content64% 
IMG OID638149674 
Productphage tail sheath protein 
Protein accessionYP_773750 
Protein GI115351911 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGA CTTCATTTTT TCACGGCATC ACGACGGCGA TCGTCGAAAG CGGCCCGCGC 
ACGATCGCGG TGCCGTCGTC GTCGATCGTT GGCATGACCG ATACCTACAC GCCCGGCGCC
GATCTGGCGC AACCGAATGT GCCCGTGCAG CTCACGAGCT ATCGCGAAGC CGTGCAGGCG
TTCGGTGAAA AAAGCGCGAT TGCACGCGCG GCCCGTGCGA TTTACGCGCA GAGCAGCGCG
GTGGTAATCG CGGTTGGTGT GCCGGCGGCG GCGGACGCCG CGCAGCTCAC GTCGGCAATC
ATCGGTGGCG TTTCGGCGGG TGGTGCGCGC ACCGGCATGC AGGCTTTGCT CGACGCAAAG
TCGCGCTACA ACGCGCAGCC GCGTTTGCTC ATTGCCCCGG GCCACACGTC GAAGCAGCCG
GTCGCAACGG CGGCCGATTC GCTCGCCGGC AAGCTGCGTG CCGTCGCCGT GATCGATGGT
CCGAACACCG ACGACGAGGC CGCGATCGCG TACGCGAAGA ACTTCGGCAG CAAGCGCCTG
TACATGGTCG ACCCCGGTGC GAAGGCATGG GACAACGCGA CGAACGGTGA GATCGCGATG
TCGGCGTCGT CGTATGCGGC GGGTCTCTTC TGCCAGACCG ACGCGAAGAT CGGGTTCTGG
GCATCGCCGT CGAACAAGGA GATCGTGGAG ATCACGGGCA CGGCACGACC GATCGAATAC
CTCGACGGCG ACGAGACGTG TCGCGCGAAT CTGCTCAACA ACGCGAACGT CACGACGATC
ATTCGCGACG GCGGGTTCCG CCTGTGGGGG AACCGCACCC TGTCGGCCGA TCCGAAGTGG
AAGTTCGTCA CGCGGGTGCG CACGCTCGAC ATCGTGATGG ACGCGGTGCA GGCCGGGCAC
AAGTGGGCGG TTGACCGCGG CATCACGGCG ACGTACGTCA GTGACGTGAC CGAAGGGTTG
CAGGCGTTCA TGCGCGACCT GAAGCGTCAG GGCGCCCTAA TCAATTTCGA GGTCTACCCG
GATCCGGAGT TGAACACGGC GAGCCAGCTC GAAGACGGCA AGGTGTATTG GAATATCCGA
TTCACGGATG TCCCGCCGGC CGAAAACCCG ATTTTCCGCT TCGAGGTCAC GAATCAGTGG
CTGACCGAAG TGCTCGACAA CCAGATCTAA
 
Protein sequence
MAATSFFHGI TTAIVESGPR TIAVPSSSIV GMTDTYTPGA DLAQPNVPVQ LTSYREAVQA 
FGEKSAIARA ARAIYAQSSA VVIAVGVPAA ADAAQLTSAI IGGVSAGGAR TGMQALLDAK
SRYNAQPRLL IAPGHTSKQP VATAADSLAG KLRAVAVIDG PNTDDEAAIA YAKNFGSKRL
YMVDPGAKAW DNATNGEIAM SASSYAAGLF CQTDAKIGFW ASPSNKEIVE ITGTARPIEY
LDGDETCRAN LLNNANVTTI IRDGGFRLWG NRTLSADPKW KFVTRVRTLD IVMDAVQAGH
KWAVDRGITA TYVSDVTEGL QAFMRDLKRQ GALINFEVYP DPELNTASQL EDGKVYWNIR
FTDVPPAENP IFRFEVTNQW LTEVLDNQI