| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1776 |
|---|
| Symbol | |
|---|
| ID | 4311114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1964018 |
|---|
| End bp | 1965022 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149590 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_773666 |
|---|
| Protein GI | 115351827 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.174657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGA AGATCACTTA TTCGCAGGCG ATCAACGAGG CGCTCGCGCA GGAAATGGCG
CGCGACGACA GCGTGATCGT GATGGGCGAG GACAATGCAG GCGGCGCGGG CGCGCCGGGC
GAGGACGACG CGTGGGGCGG CGTGCTCGGC GTGACGAAGG GGCTGTTCCA CAAGTTTCCG
GGGCGCGTCC TCGACACGCC GCTGTCGGAG GGCGGCTACA TCGGCACGGC GGTCGGTGCG
GCCGCATGCG GGATGCGGCC CGTCGCGGAA CTGATGTTCA TCGATTTCAT GGGCGTGTGC
TTCGACCAGA TCTTCAACCA GGCCGCGAAA TTCCGCTACA TGTTCGGCGG CAAGGCCGTG
ACGCCGGTCG TGATCCGCGC GATGTACGGC GCCGGTCTGC GCGCGGCCGC GCAGCATTCG
CAGATGCTCA CGTCGCTGTT TACGCACATC CCGGGGCTGA AGGTCGTGTG CCCGGCGACG
CCGTATGACG CGAAGGGGCT GCTGATCCAG GCGATCCGCG ACGACGATCC CGTGATCTTC
CTCGAACACA AGCTGCTCTA TACGCGGGAA GGCGACGTGC CTGAGGAATC CTATGCGATT
CCGTTCGGCG AGGCGAGCGT CGTGCGCGAA GGCGACGACG CGACGATCGT CACGTACGGC
CGGATGGTGC ATCTCGCGAC CGACGCGGCC GCGAAGCTCG CGAAGGACGG CATCCACGTC
GACGTGATCG ACCTGCGCAC GACGTCGCCG CTCGACGAGG AAACGATCCT CGAAAGCGCG
GCGCGCACCG GCCGCGTGGT GGTCGTCGAC GAGGCGAACC CGCGCTGCTC GATCGCGACC
GACATCGCCG CGCTCGTCGC GCAGCGCGCG TTCCGGACGC TCAAGGCGCC GATCGAGCTC
GTGACCGCGC CGCACACGCC CACGCCATTC GCCGGCGTGC TGGAAGACCT GTATATCCCG
TCCGCCGATG CGATCGCGCA GGCGGTACTG AAGACGAGGA GCTGA
|
|---|
| Protein sequence | MARKITYSQA INEALAQEMA RDDSVIVMGE DNAGGAGAPG EDDAWGGVLG VTKGLFHKFP
GRVLDTPLSE GGYIGTAVGA AACGMRPVAE LMFIDFMGVC FDQIFNQAAK FRYMFGGKAV
TPVVIRAMYG AGLRAAAQHS QMLTSLFTHI PGLKVVCPAT PYDAKGLLIQ AIRDDDPVIF
LEHKLLYTRE GDVPEESYAI PFGEASVVRE GDDATIVTYG RMVHLATDAA AKLAKDGIHV
DVIDLRTTSP LDEETILESA ARTGRVVVVD EANPRCSIAT DIAALVAQRA FRTLKAPIEL
VTAPHTPTPF AGVLEDLYIP SADAIAQAVL KTRS
|
|---|
| |