| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1637 |
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| Symbol | |
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| ID | 4311063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1811350 |
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| End bp | 1812168 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638149452 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_773528 |
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| Protein GI | 115351689 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00717804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCG AATGGCGAGA TCTCGCTTTT CACCGGGAGA TTGGTTCGGC CATCGATGCC
CTCGATGGCC CGCATTTCTG GGCGCGCCTC ACGCGGGTGC TCGAACGGCA CGTCGCTTTC
GACAACTGGG TCGCGCTGTG TTTCGCGCGC GACGCCGCCC CGCTCGTGCT CGCCGAACAG
GCGATGCCCG ACGGCAAGAC CGACCTGATG TTTCAGGACT ATCTGGCCGC GCTCTATCAG
CTCGATCCGT TCTATCTCGC CGCGTTCGAA ACGCAGGCGC CCGGCTTCTA CACGCTTGCC
GACGTCGCGC CGGACAACTT CCGGATGACC GAATACTACG AGCGGTATTT CAAGAAGAAC
ATCGTCGGCG ACGAAGTGCA TTTCAACGTC GTGATCGATC GCGATCACAC GCTCGGCTTC
TCGCTCGGCA AGACGAGCAA GTACGACGAG CGCGAAATGG CACTGCTCAC GCTGTACACG
CCATGGGTGC TGTCGCTGAT GCAGCAGCGC TTGCGGTTCG AAACGTTCGC GGTCAAAGGC
GCGTCGCGCC CAGCGGAAAT AGACGCGCCC GATCCGCATG CGCGCTTCGG CATGCTGACC
GGAAAGAACG GGCGCGGCGC ATTGACGACG CGCGAAATCG AAGTCGCAAT GCTGTCGTTG
AGCGGATTCT CGTCACGCGC GATCGGGGAG AAGCTGTCGA TCTCGTTCGA GACCGTGCGT
GCGCACAAAA AGCACATCTA CGCGAAGCTC GGCGTCGGAT CGCAATCCGA GCTGTTTGCG
ATGTTCTACG ATCGGGGACG AACGGATGAG CGCGGGTGA
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| Protein sequence | MDFEWRDLAF HREIGSAIDA LDGPHFWARL TRVLERHVAF DNWVALCFAR DAAPLVLAEQ
AMPDGKTDLM FQDYLAALYQ LDPFYLAAFE TQAPGFYTLA DVAPDNFRMT EYYERYFKKN
IVGDEVHFNV VIDRDHTLGF SLGKTSKYDE REMALLTLYT PWVLSLMQQR LRFETFAVKG
ASRPAEIDAP DPHARFGMLT GKNGRGALTT REIEVAMLSL SGFSSRAIGE KLSISFETVR
AHKKHIYAKL GVGSQSELFA MFYDRGRTDE RG
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