Gene Bamb_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1548 
Symbol 
ID4310208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1714323 
End bp1715228 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID638149364 
Producthypothetical protein 
Protein accessionYP_773440 
Protein GI115351601 
COG category[S] Function unknown 
COG ID[COG4849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.268009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA CCTCGCCCAC CCGCCCGCTT GAAGTCGACG CGCGCCGGCC GCTCGAGCCG 
GCGGCCGCCG CGCTGCTGCA GGCGGTCGGC ACGACCTGCG TGCAACTCGA CACGGCATTC
GTCGTCGCCG GCGCAACTGC GCGCGACATC CTGATGTGGC ATGTCCACGG CATCCGGCCG
GTACGTGCGA CGCGCGACGT CGACGTCGCG GTGTGCGCAG TGAGCTGGCC GTTTCACGAG
CGGCTCGTCG ATGCGCTCGT CGCGACCGGG CAATTCGCAC GTGCGCCGAA GCATCAGCAG
AAACTGCTGT TCGACAGCGG GACGCAAGGA TTTCGCACGG AGCTCGATCT CGTGCCGTTC
GGGCCGCTCG AAGCACCGCC CGGCGAAATC GCATGGCCGC CGCGCGGCGA TTTCGTGCTG
AACGTGCTGG GATTTCAGGA GGCGGTCGAT ACGGCGCTGG CCGTGTCGAT CGGCGCCGAT
ATCGCTGTGC CGGTGGCGAG CCTGCCGGCG CTCGCGCTGC TGAAGTTGCT CGCGTGGAAG
GATCGGGGCG CGCGCCAGAA CAGCGACGCG TACGACCTGC TGTTCCTGCT CACGCATTTT
CACGACGCGG GCAATCGCGA GCGCATCTGG GACGTCGCGC CCGATCTGCT CGAACGGCAC
GGCTTCCAGC CGGAGCTGGC GGCGGCCGGG TTGCTCGCGC GCGATGCGAA GCGGATTGCT
TCGCCGCAAA CGCACGAGGC GATCCGCGCG CTGTTATCGG ACGAAGCGGT TTACGCGACC
CTCGCGCAGG ACCTGCAGGG CCGCGCATTC GCGCTGTTGC CTGGTGAATT CAACGATGAC
GCTGACCGGT ATCTCGACGC GTTCCGCAGT GCTTTCCTCT CGGAACCGCC CGTTCCTCAC
GCGTGA
 
Protein sequence
MTDTSPTRPL EVDARRPLEP AAAALLQAVG TTCVQLDTAF VVAGATARDI LMWHVHGIRP 
VRATRDVDVA VCAVSWPFHE RLVDALVATG QFARAPKHQQ KLLFDSGTQG FRTELDLVPF
GPLEAPPGEI AWPPRGDFVL NVLGFQEAVD TALAVSIGAD IAVPVASLPA LALLKLLAWK
DRGARQNSDA YDLLFLLTHF HDAGNRERIW DVAPDLLERH GFQPELAAAG LLARDAKRIA
SPQTHEAIRA LLSDEAVYAT LAQDLQGRAF ALLPGEFNDD ADRYLDAFRS AFLSEPPVPH
A