| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1540 |
|---|
| Symbol | |
|---|
| ID | 4311800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1705789 |
|---|
| End bp | 1707165 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149356 |
|---|
| Product | lysine/ornithine N-monooxygenase |
|---|
| Protein accession | YP_773432 |
|---|
| Protein GI | 115351593 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3486] Lysine/ornithine N-monooxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.310035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAG AAACCGTATT CGACCTGATC GGCGTCGGCT TCGGGCCGTC GAATCTGGCG
CTGGCCATCC GTCTGGAGGA GCGGCGCGCG GCGCGCCCGC TCGCCCATTG CTTCATCGAA
CGGCAGCCCG AATTCGGCTG GCACCGCGGC ATGCTGCTCG ACGACTGCCG GATGCAGATC
TCGTTTCTGA AGGATCTCGT CACGATGCGC GATCCGAAGA GCCGCTACAC GTTCATCAAT
TACCTGTTCG AACGCGGCCG GCTGAACGAA TTCGTCAATC TGAAGAACTT CTATCCGACC
CGCGTCGAAT TCCACGACTA CCTGAGCTGG GTCGCCGACG CGTTCGACGC GCACGTCCAT
TACAGCGAGA CCGTCATGGC GATCGAGCCC GTGCGCGGCG ACGGCGCGCG GATCGACGCG
CTGCGCGTGC TGTCGCGCGA CGCGACCGGC CGCGAGCGCC AGCGCGTGAC GCGTGCGCTG
TCGGTCGGCG TCGGCGGCAC GCCGGCGGTG CCGGATGCGT TCGCCGCGCT CGGCCGCGAT
CGCGTGATCC ATTCGTCGTC GTACCTGACC GACATCGACC GGCTGGTCGC GTCGCCGGAC
GGCGAACGCC GCCGCGTCGC GGTGATCGGC GCGGGGCAGA GCGCGGCCGA GGTGTTCATC
GACCTCGCGC GCCGCTTCCC GCATGTCGAC GCGCACCTCG TGATGCGCGC GGGCGCGTTG
AAGCCGGCCG ACGACAGTCC GTTCGTCAAC GAGATCTTCA GCCCCGAGTT CACCGACGTC
GTCTACGCGC AGCCGCACGA TGCACGCCGC GCGCTGCTCG AGCGCTACCG CGACACCAAC
TACGCGGTGG TCGACCGGCC GCTGATCGAG CAGATCTACG AAATGCTGTA CCTGCAGCGC
ATCGACGGCA CGCCGCGTCA TGCGCTGCTC GCGAACAGCG CGATCGAGGG CGCGGTGCGC
ACCGCCGACG GCCGCATCGA GCTGACGCTG CGCGACCGGA TGAACGGTGC GACGCGCGTC
GAGCGCTTCG ACGCGCTCGT GCTCGCGACC GGTTATCGGC GCGACACGCA TTCGGCGCTG
CTCGAAGGGC TCGCACCGCA CCTCGGCGAT GCGCTCACGC GCGGCGACGT CACGCGCGAC
TACCTGCTCG CGACGCCCGA GCACTTCGCG CCGCGCATCT ACCTGCAAGG CTGCTGCGAA
GACAGCCACG GCCTGTCCGA CACGCTGCTG TCGGTGCTGG CACGCCGCGC GGACGAGATC
TGCGCGTCGC TCGAAGACGG GATCGCGCCC GCCCACGACG ATGGCGCGGC CCGGGCATTG
CATGAACAAC GACATCAAAA CGGGGCGAGC GCGGGCCGCA TGGCTTTCGC TCTTTGA
|
|---|
| Protein sequence | MQRETVFDLI GVGFGPSNLA LAIRLEERRA ARPLAHCFIE RQPEFGWHRG MLLDDCRMQI
SFLKDLVTMR DPKSRYTFIN YLFERGRLNE FVNLKNFYPT RVEFHDYLSW VADAFDAHVH
YSETVMAIEP VRGDGARIDA LRVLSRDATG RERQRVTRAL SVGVGGTPAV PDAFAALGRD
RVIHSSSYLT DIDRLVASPD GERRRVAVIG AGQSAAEVFI DLARRFPHVD AHLVMRAGAL
KPADDSPFVN EIFSPEFTDV VYAQPHDARR ALLERYRDTN YAVVDRPLIE QIYEMLYLQR
IDGTPRHALL ANSAIEGAVR TADGRIELTL RDRMNGATRV ERFDALVLAT GYRRDTHSAL
LEGLAPHLGD ALTRGDVTRD YLLATPEHFA PRIYLQGCCE DSHGLSDTLL SVLARRADEI
CASLEDGIAP AHDDGAARAL HEQRHQNGAS AGRMAFAL
|
|---|
| |