Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1536 |
Symbol | |
ID | 4311796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1688016 |
End bp | 1689761 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638149352 |
Product | cyclic peptide transporter |
Protein accession | YP_773428 |
Protein GI | 115351589 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0345189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCTG CCCACGAGCC TTCTTCCCCG CCGTCCCTCG ACGCCTCCCC CGGCCGCCCC GCGGCCCGCC TGATCCTCGC GCTGCTGCGC GAAAGCCGCG CGTCGCTCGC GCTGGCGCTC GTCGCCTGCG TGCTCAACGG CGTCGCGAGC GTGCTGCTCG TCGCGACGCT GAACGGCGCG CTCGCGCAGC CCGGCGCGGC CGATGCGTCG CTTGCGTGGC GCTTCGCGCT GTGCGCGGTG ATCGCGCTCG TCACGCGGAT CGTGTCGGGC ACGCTGTTCG CCCGGCTGTC GCAGGACACG ATGGCGCGGC TGCGCGTGCA TCTCGCGCGG CGCGTCGGCG CGGCCGAGCT GCGCGACATC GAGCGGATCG GCGCGGCGCC CGTGCAGTCG GTGCTGACCG ACGACGCGAC CAACGTGTCG ATGCTGTTCT TCGCGCTGCC GAACCTGGTG ATGCACGGCT CGATCGTGTT CGGCTGCCTC GGCTATCTCG CGTGGCTGTC GTGGCCCGTG TGCGTGCTCG CGCTGACCGC GATCATCGCG GGCTCGCTCG GCTATCACAC CGGCGATCGC CGCGCGATCG CATCGCTCGA AGCGGCCGGC CAGGCGCAGG ACCGCCTGTT CGGCTATCTC GGCTCGCTGT TCTCCGGCGC GAAGGAGCTG AAGCTGCACG ACGCGCGCGC ACGCCAGTTC GTCGACGGCC AGCTCGGCGC CGCGATCGGC GAGGTGCGCG ACCACCGCCG CCGCGCGTTC AGCGCGTATG CGGTCGGCGT CGGCTGGATC ATCTTCCTGT TCTACGTGTT CCTCGGCGCG GCCGCGTTCT GGCCGCAGCT GGGCGTGCAT GCCGATGCCG GTACGGCGGC CGGCTACGTC GTCGTGTTCC TGTTCATGCT GGTGCCGCTC GACGGGCTGC TGAACAACCT GCCGACCGTC AACGCGGCAC GCGTGTCGCT CGGGCGCATC GAAGGCGTGA TGGCCGAGTT CGGCGCGCTG CGCACGGTGC CGCCCGCGAG CGACGCGCCC GACGTGCCGC CGGCCGGCGC CGTCACGCTG CGCGGCGTCA CGCATGCGTA CTTCCACGAG CGCGACGAGC GGATGTTCCG CATCGGGCCG ATCGATCTGA CGATCCGGCC GGGCGAGCTC GTGTTCATCG TCGGCGGCAA CGGCAGCGGC AAGACGACGC TCGCCAAGGT GCTGACCGGG CTCTACGAGC CGGAGGAAGG CACGATCGAG GTCGAGGGCC GCACGATCGG CTGGCGCGAG CGCGCCGCGT ACCGGCAGCG CTTCAGCGCG GTGTTCAACG ACTTCCACCT GTTCGATGCG CTGCTCGGCA TCGTCGATCC GGACGATCCG GCGCGCACGC AGGCCGATGC GCGCGCGAAC GCGCTGGTCG CGAAGCTCGC GCTCGATCAC AAGGTGAAGG TCGTCGATGG CGCGTTCTCG AACCGTGCGC TGTCGACCGG GCAGCGCAAG CGGCTCGCGC TCGTTGTCGC GTATCTGGAA GACCGCCCGT TCTACCTGTT CGACGAATGG GCGGCCGACC AGGATCCGTC GTTCAAGGCC GTGTTCTACG AGCAGCTGTT GCCCGAGCTG CGCGCACGCG GCAAGGCCGT GATCGTGATC ACGCACGACG ACCGCTATTT CGATCTCGCC GATCGGCTGC TGAAGCTCGA TAACGGTCAG ATCGTGAGCG ACACGGCGCC CGCGCGTTCA CGTGCACAAG CGGGAGTCGA TGCGCTGAGC GCGTAA
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Protein sequence | MTAAHEPSSP PSLDASPGRP AARLILALLR ESRASLALAL VACVLNGVAS VLLVATLNGA LAQPGAADAS LAWRFALCAV IALVTRIVSG TLFARLSQDT MARLRVHLAR RVGAAELRDI ERIGAAPVQS VLTDDATNVS MLFFALPNLV MHGSIVFGCL GYLAWLSWPV CVLALTAIIA GSLGYHTGDR RAIASLEAAG QAQDRLFGYL GSLFSGAKEL KLHDARARQF VDGQLGAAIG EVRDHRRRAF SAYAVGVGWI IFLFYVFLGA AAFWPQLGVH ADAGTAAGYV VVFLFMLVPL DGLLNNLPTV NAARVSLGRI EGVMAEFGAL RTVPPASDAP DVPPAGAVTL RGVTHAYFHE RDERMFRIGP IDLTIRPGEL VFIVGGNGSG KTTLAKVLTG LYEPEEGTIE VEGRTIGWRE RAAYRQRFSA VFNDFHLFDA LLGIVDPDDP ARTQADARAN ALVAKLALDH KVKVVDGAFS NRALSTGQRK RLALVVAYLE DRPFYLFDEW AADQDPSFKA VFYEQLLPEL RARGKAVIVI THDDRYFDLA DRLLKLDNGQ IVSDTAPARS RAQAGVDALS A
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