| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1489 |
|---|
| Symbol | |
|---|
| ID | 4309573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1634014 |
|---|
| End bp | 1635072 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149305 |
|---|
| Product | permease |
|---|
| Protein accession | YP_773381 |
|---|
| Protein GI | 115351542 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.283675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CACGCACCCA ACCCAATCCG GCGCTCGGCT GGATGACCTT CCTGCTGATC
GCAGTCGCGG GACTGTTCTA CGTGAAATGG TTCCCGTACT ACAACAAGGC ATTCGTTGCC
GCCGAGCATC ATTCGATCGG CCAGTCGATC CTGATGGGCA CGTCGGCGAC CGCGCCCGAG
CCGTCGCTGA AGGCGGCGCT CGACTACGCA TGGGCATACG GCAAGGCGAT CTGGCAGGCG
ATGGTGCTCG GCCTGCTGCT CGGTTCGGCC GTGCAGGCGC TGCTGCCCGC GCACTGGGTC
GCACGCGTGC TCGGTCGCAC GGGCTTCGGC AGTGTCGCCG CGGGCGGCCT GCTGTCGTTG
CCCGGCATGA TGTGCACGTG CTGCGCGGCG CCGGTCGTCG CCGGCCTGCG CGCGCGGCAC
GCGTCGCCGG GCGGCGCGGT CGCGTTCTGG CTCGGCAACA CGGTGCTGAA TCCGGCCGCG
CTGGTGTTCA TGGGCTTCGT GCTCGGCTGG CACTGGAGCG TGCTGCGGCT CGTGCTCGGC
ATTGCGATGG TGTTCGGGAT CGGCTATCTG CTGAACCGCA TCGCGCGTCC CGAGGACCGC
GGCATCGACG ACGCGCACCT CGCCGCGCTG GCGGCCGGGC AGGCCGCGGC CGGCAATCCG
TTCGTCCGCT GGATCAAGTT GCTCGTGCGC ATGGCCGTGC GGCTCGTGCC CGAATACATC
GTGCTCGTGC TGCTGCTCGG CGCGGCGCGC GCATGGCTGT TCCCGCATAT CGGCCCGGAC
ATCGGCAACC ATCTCGGCTG GATCATCGCG TTCGCGGTCG CGGGCACGTT GTTCGTGATC
CCGACGGCCG GCGAGGTGCC GATCATCCAG GCGATGCTGT CGCTCGGCAT GGGCGTCGGC
CCGGCCGCCG CGCTGCTGAT GACGCTGCCG CCGATCAGCG TGCCGTCGCT CGCGATGCTC
GCGCGTTCGT TCAAGCCGTA CATGCTGGCG ATCGTCACGG CCCTCGTGGT CGTGTTCGGG
ATCGCGAGCG GGCTGCTCGC GATCGCGTTC GGGTTCTGA
|
|---|
| Protein sequence | MTTTRTQPNP ALGWMTFLLI AVAGLFYVKW FPYYNKAFVA AEHHSIGQSI LMGTSATAPE
PSLKAALDYA WAYGKAIWQA MVLGLLLGSA VQALLPAHWV ARVLGRTGFG SVAAGGLLSL
PGMMCTCCAA PVVAGLRARH ASPGGAVAFW LGNTVLNPAA LVFMGFVLGW HWSVLRLVLG
IAMVFGIGYL LNRIARPEDR GIDDAHLAAL AAGQAAAGNP FVRWIKLLVR MAVRLVPEYI
VLVLLLGAAR AWLFPHIGPD IGNHLGWIIA FAVAGTLFVI PTAGEVPIIQ AMLSLGMGVG
PAAALLMTLP PISVPSLAML ARSFKPYMLA IVTALVVVFG IASGLLAIAF GF
|
|---|
| |