Gene Bamb_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1461 
Symbol 
ID4309912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1609703 
End bp1610866 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content69% 
IMG OID638149276 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_773353 
Protein GI115351514 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACA TGACCGATTC CGCTTCCGTT TCCGATTCCG CCGAAGCCGC CCAGCCCGAC 
GTGCGCACGT ATGTCGCGAA CCGCATCGGC TATCTCGAAC TGAACCGGCC GAAGGCGCTG
AACGCGCTGT CGGTCGGGAT GATCCGCGTG ATGCAGCAGG CGCTCGATGC GTGGCGCGAC
GACGCCGACG TGCTGGCCGT CGTCGTGCAC AGCCCGCATC CGCGCGCGTT CTGCGCGGGC
GGCGACGTGC GCTTCTTCCA CGATGCGTGG CAGCGCGGCG ACCGCGATGC GATCGACGGG
TTCTTCATCG ACGAATACAC GCTCAACCAC ACGATCTTCA CCTATCCGAA ACCGTACATC
GCGTTGATGC ACGGCGTCGT GATGGGCGGC GGCATGGGCA TTTCGCAGGC TGCGCGGCAT
ACGGGCGGCC TGCGCGTCGT CACCGATTCG ACGAAGATGG CGATGCCCGA AACGCGCATC
GGCCTGTTCC CGGACGTCGG GATGAGCTGG TTCCTCGCGC GCACGCCGGG CGCGATCGGC
CGCTATCTCG CGGTGACCGG CGCGTCGCTC GACGCGGCCG GCGCCCTGTA TGCGCAGCTC
GCCGACGTCT ATCTGCCCGA TGCCGCGCTG CCGGCGCTGC TCGATACGCT GCGCAGCGCG
CGCATCGACA GCGGCGCGCA GGCGGTCGCG TGCGTGGCCG ACGCGGCTGC CGCGCACAAG
GTCGTGCCGA CGCCCGACAC GTCGGCGCTG GCCGACGCGC GCGCCGGGAT CGATCGGCAT
TTCGCGCAAC CCGATATCGG CGCGATCCTC GCGTCGCTCG ACGCCGAGCA GGATTGCGCG
GCCGTCGACG GATGGGTCGA GAAGGCGACT CACGCGATGC GCAGCCAGTT GTCGCCGCTG
TCGATGGCCG TATCGCTCGA AGTCGTCGAA CGGGCGCGTG GCGCGACGAT GGCCGATTGC
CTGCGGCGCG ACCTCGACCT CACGCGCTCG ACGTTCGCGC ACGGCGACGT GATCGAAGGC
GTGCGCGCGC TGATCGTCGA CAAGGACCAC CAGCCGGTCT GGCGCTTCAA GTCGGCCGCC
GATATCGACC GCGCCGACGT GCTCGCGATG TTCGACAGCC CGTGGACGCC CGACACGCAT
CCGCTGCGCA ACCTGAAGGA CTGA
 
Protein sequence
MAHMTDSASV SDSAEAAQPD VRTYVANRIG YLELNRPKAL NALSVGMIRV MQQALDAWRD 
DADVLAVVVH SPHPRAFCAG GDVRFFHDAW QRGDRDAIDG FFIDEYTLNH TIFTYPKPYI
ALMHGVVMGG GMGISQAARH TGGLRVVTDS TKMAMPETRI GLFPDVGMSW FLARTPGAIG
RYLAVTGASL DAAGALYAQL ADVYLPDAAL PALLDTLRSA RIDSGAQAVA CVADAAAAHK
VVPTPDTSAL ADARAGIDRH FAQPDIGAIL ASLDAEQDCA AVDGWVEKAT HAMRSQLSPL
SMAVSLEVVE RARGATMADC LRRDLDLTRS TFAHGDVIEG VRALIVDKDH QPVWRFKSAA
DIDRADVLAM FDSPWTPDTH PLRNLKD