| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1400 |
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| Symbol | |
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| ID | 4309624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1543837 |
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| End bp | 1544337 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638149211 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_773292 |
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| Protein GI | 115351453 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.174968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATC TCCTCAGCAC CAGCATTTTT TTTGCCTGGG CCGCTCTCGT TGCTGCCGGT
GATATTCGAT TTCGGCTCGT TCGGAATTCG CTTGTCATCT GCGGAGGCAC TGCTGCGCTC
GTCAGTTCAC TGATACACGC AAATCCATTT GGTATTTCAA CCGGGCAGGC ATTGATCGGC
ATGCTGGTCG GTTTGGTCAG TTTCTTCCCG CTTTTTGCGA TGCGCGTCAT GGGTGCGGCG
GACGTCAAGG TATTCGCGGT CCTCGGTGCG TGGTGCGGTT TGCCGATATT GCTTTGGCTG
TGGGTGATTG CCAGCCTTGC CGCCGGCGTG CACGTCCTGG GATTGATGCT GCTCACTCGC
ACGCCGCTCG GCGCGTTATG GGTGCGCGGA TTGCCGGCAA TGGCGCTCGC CGGACGGCGC
TCGACACCGT ACGCGGCGTG TCTCGTCGTT CCCGCGGCCA TTTGGCTGGG CTATCTGGTC
GTTACCTGGA GCGGGCGATG A
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| Protein sequence | MAHLLSTSIF FAWAALVAAG DIRFRLVRNS LVICGGTAAL VSSLIHANPF GISTGQALIG
MLVGLVSFFP LFAMRVMGAA DVKVFAVLGA WCGLPILLWL WVIASLAAGV HVLGLMLLTR
TPLGALWVRG LPAMALAGRR STPYAACLVV PAAIWLGYLV VTWSGR
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