| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1353 |
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| Symbol | |
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| ID | 4311270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1486325 |
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| End bp | 1487350 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149162 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_773245 |
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| Protein GI | 115351406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTACA ACGACTCCAA TCCGGCGACG CCTCCGGCGC GCCGCACGTT TCTGGCACAG
GCCGGCGCCG GGCTGGCGGC CGGCGTCGCG ATGGTCGCGG GCGTCGCGAT GGTCGCGGGC
GCCTCGCAGC CGGCAGCCGC CGCGCCGGCA CCGCAGGAAG ACACGCGCGC CGGCGGATTC
TGGCCGAACG ATACGCGGCT CGTCATCTCG ATCTCGATGC AATTCGAGGC CGGCGGACAA
CCGCCGAAGG GCGCGGACAG CCCCTTCCCG CCCGTCGAAT TTCCATCGTC GATGCCGGTC
GATCTGGCGT CGGCCACGTG GTTCGCGTAT GGCTATCGTG AAGGGATTCC GCGCCTGCTT
GACCTGTGGG ATCGGCATGG CGTGAAAGTC ACGTCGCACA TGATCGGGGA GGCCGCACGC
CGGCATCCCG AACTGGCGCG CGAGATCGTG TCGCGCGGCC ACGAAGCGGC CGCGCACGGC
CCGACATGGC GCTCGCAATT CGCGATGACC CGCGACGACG AGCGTCGCTT CCTCACCGAG
GCCCGCGACA TGGTCGAAGC GGTGACGGGA CAGCGCCCGG TCGGCTACAA CTGCAACTGG
CTGCGGCGCG GGCCGCACAC GCTGCCGCTG CTGCAGGAAC TCGGTTACGT GTATCACATC
GACGACGTCA GCCGGGACGA GCCGTTCATC GAGACCGTCG GCGGTCGCGA TTTCGTGGTC
GTCCCGTACA CGCTGCGCAA CAACGACATC CTGCTGATCG AGGGCCGCAA CTACTCGCCG
ACGATGTTTC TCGAGCAGAT CAAGCTCGAT TTCGACCAGC TGTACGCGGA AGCCGGGCAG
CGGCGCAGAT TGATGTCGAT CAGCGCGCAC GACCGGATCA GCGGCACGCC GCAGATGGTC
CGCGCCTGGG ATGCTTTCCT GCGCTACGCC CGATCGCATC CGGGGGTGGC CTTCATGCGC
AAGGACGACA TCGCCCGCTT CGCGCTGCGC AGCCCGTCGA CGCTGCGCGA AGCCGAAACG
ATCTGA
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| Protein sequence | MTYNDSNPAT PPARRTFLAQ AGAGLAAGVA MVAGVAMVAG ASQPAAAAPA PQEDTRAGGF
WPNDTRLVIS ISMQFEAGGQ PPKGADSPFP PVEFPSSMPV DLASATWFAY GYREGIPRLL
DLWDRHGVKV TSHMIGEAAR RHPELAREIV SRGHEAAAHG PTWRSQFAMT RDDERRFLTE
ARDMVEAVTG QRPVGYNCNW LRRGPHTLPL LQELGYVYHI DDVSRDEPFI ETVGGRDFVV
VPYTLRNNDI LLIEGRNYSP TMFLEQIKLD FDQLYAEAGQ RRRLMSISAH DRISGTPQMV
RAWDAFLRYA RSHPGVAFMR KDDIARFALR SPSTLREAET I
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