Gene Bamb_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1308 
Symbol 
ID4309017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1434859 
End bp1435872 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID638149117 
Productinositol 2-dehydrogenase 
Protein accessionYP_773200 
Protein GI115351361 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTGC AAATCGGCGT GATCGGCTGC GGCGCGATCG GCCAGGACCA TATCCGCAGG 
CTGACGCGCA CGCTGTCCGG CGCGCGCGTG GTGGCCGTCA ACGACATCGA TCCGCAGCAG
GCGCGCGACG CGGTGACGAA GTACGGGCTC GATGCGGAAA TCTACGGCGA CGGCCACGAG
GTGGTCGCGG CCGCCGACGT GCAGGCCGTG CTCGTCACGT CGTGGGGGCC GACGCACGAA
GCGTTCGTGC TCGACGCGAT CGCGCACGGC AAGCCGGTGT TCTGCGAGAA GCCGCTCGCG
GTGACGGCGC AAGGCTGCAT GCGGATCGTC GAGGCCGAGG TCGCGCACGG CCGCCGGCTC
GTGCAGGTCG GCTTCATGCG GCCGTACGAC GAAGGTTATC GCGCGCTGAA GCACGTGATC
GACAGCGGCG AAATCGGCGC GCCGCTGATG CTGCATTGCG CGCACCGCAA CCAGTCGGTC
GGCGAGCGCT ACACGACCGA CATGGCGATC ACCGATACGC TGATCCACGA ACTCGACGTG
CTGCGCTGGC TGCTCGGCGA GGACTACACG AGCGCGCAGG TCGTCTACCC GAAGAAGACG
CGCCACGCGA GCGCGCATCT CGCCGATCCG CAGATCGTGC TGCTCGAAAC CGCGAGCGGG
GTGCGCATCG ACGTCGAGAT CTTCGTCAAC TGCCAGTACG GCTACGACAT CCAGTGCGAG
GTCGTGGGCG AGAACGGCAT TGCGAAGCTG CCCGATCCGC CGGCCGTCGG GCTCAAGCAC
GCGGCGCGGC GATCGGTCGA GATCATGACC GACTGGAAGG AGCGCTTCAT CGCGTCGTAC
GACGTCGAGC TGCAGGCATT CATCGACGGC GTGCGGCAAG GTGCGCTGAC CGGCCCGTCC
GCGTGGGACG GCTACGCGGC GGCGGTCGCG GCCGACGCGT GCGTGCGCGC ACAGCAGAGC
GGGGCGGTCG AGCCGATCGC GATGGCCGAA CGTCCGGCGT TCTATCGCGG CTGA
 
Protein sequence
MTLQIGVIGC GAIGQDHIRR LTRTLSGARV VAVNDIDPQQ ARDAVTKYGL DAEIYGDGHE 
VVAAADVQAV LVTSWGPTHE AFVLDAIAHG KPVFCEKPLA VTAQGCMRIV EAEVAHGRRL
VQVGFMRPYD EGYRALKHVI DSGEIGAPLM LHCAHRNQSV GERYTTDMAI TDTLIHELDV
LRWLLGEDYT SAQVVYPKKT RHASAHLADP QIVLLETASG VRIDVEIFVN CQYGYDIQCE
VVGENGIAKL PDPPAVGLKH AARRSVEIMT DWKERFIASY DVELQAFIDG VRQGALTGPS
AWDGYAAAVA ADACVRAQQS GAVEPIAMAE RPAFYRG