| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1289 |
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| Symbol | |
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| ID | 4311687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1412359 |
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| End bp | 1415316 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149098 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_773181 |
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| Protein GI | 115351342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0969666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG CGTATTCGCT GGTATGGAAC GACGTGCAGG GCGGCTGGAC CGTGGCAGGG
GAAACGGCCC GCCGTCGCGG CAAGCGCTCG GGCGGCAAGC GCGCGATCGC GGTGGCGGCA
TCGCTGCTGG GGTTGGTGGC GACGGGCGCG CACGCGCTGC CGACGGGTGG GGCGATCGTG
GGCGGCAAGG GCGACATCGC GACGTCGTCG GACGGCAAGG CGATGTCGGT GAACCAGCAC
ACGGACAAGC TGATCACGAA CTGGCAGGAC TTCAGCATTG CAGGCGGGGA GCGCGTGTCG
TTCCATCAGC CGACGGACAA GTCGATCGCG CTGAATCGGG TGATCGGGAC GAACGGCAGC
CAGATCCAGG GTCAGCTGGA TGCGAACGGC AAGGTATTTC TGGTGAACCC GAACGGGGTG
GTGTTCGGCA AGGGCGCGCA GGTGAACGTG GGCGGGCTGG TGGCGACGAC GCGCAACATC
TCGGACGCGG ATTTCATGGA CGGGAAGTAC CGGTTCACGG GCACGTCGAA GAACGCGGTG
GTGAACGAAG GGACAATCAC GGCTGCGGAA GGCGGGAGCG TGGCGCTGCT GGGCGCGCAG
GTGTCGAACA GCGGGACGAT CCAGGCGAAG CTGGGGCGCG TGGCGCTGGC CGCGGGCAAT
ACGATGACCG TGAATTTCGA CGGCAACGGG CTGCTGAACC TGCAGGTTGA CGATGGCGCG
GTGGACGCGC AGGTGAGCAA CGGCGGCCTG CTGAAAGCGG ACGGCGGCGA GGTGCTGATG
ACGGCGCGCG CGGCAGGTGA CCTGCTGGGC GCGGTGGTGA ACAACACGGG GACGATCGAG
GCGAAGGGAC TGAATTCGCG CAGCGGGAAG ATCACGCTGG AAGGCGACCT GGTGAAGGTG
GCCGGCAAGC TGGATGCGAG CGGGCAGGAA GCGGACGCAT CGGGTGGGGT GGTGACGACG
CGCGGCGAGC GTGTCGAGGT GGCGAACGAC GTGCAGGTCG ACACGCGCGC GCCGGGCGGT
CGCACGGGCA CATGGAAGAT CGAAGCCGCG AACGCCGGCG TGGGACTGAA CGGCAATTCC
AGCGAGTCGG GCAGTGACGC ACTCGGCGCG GATACGCTGT CGCGCGCATT GGGCACGACG
AATGTCGAGC TGGCCAATAC GAAGGGCAAC CTGACGGTAG ATGGCTCGGT GAACTGGGCG
AGCGACAACA CGCTGACGCT GACGTCGCAG CATGGCGACG TGGATCTGAA GAAGTCGCTC
GACGCGAGCG GCGAGAACGC GGGGCTGACC GTGAACGCGG CGAAGCAGAT CCGCGTGCAT
GACAAGGTGA CGCTGACGGG CCGCAACGCG CACCTGGAAC TGAACTCGGG CAGCGGTCAC
ACGCTGACCA ACGCCAATGC GGTGGTCACG CTGTCGGGCC AGAACGCGTC GTTCCGCGCG
AACGGCGAGG ACTATACGGT GATCCACGAC CTGGCCGGGC TGCGCAACGT GGACGCGAAC
CTGTCCGGCC GTTACGTGCT GGGCAATGCG ATCAAGGGCA GCGGCCGCTT CCGCAGCATC
GGCGGCTCGA ACGGGTTCGG CGGCGTATTC GACGGCTTCG GCAACACGGT CAGCGGCTTG
ACCCTCTACA ACGACGCCGA TGCGGACAGC GTAGGCTTGT TCGGGACCAA CTGGGGGCGC
ATTGCCAACC TGAAGCTGCA GGGGGGCACC GTCAACGGCG TGTCGTCGTA TGCGTCTGGC
CAGCCGCTCT TCGTGGGCTC GCTGGTCGGT ATCAACTTCG GCACCCTCTC GAACGTCGCC
GCGCGTGACG TGCTGGTCAC GGGCACGGGC AGCGGCACAA CGATTCTCGG CGGCCTGGTC
GGCTGGAACC TGAGCGGCCA GATCGATCGC GCGTCGGTGT CGGGGCGCGT CGAGGGTGAC
CGCAGCACGA TCAAGATTGG CGGCCTGGTG GGCGAAAACC TGACGGTGTT GCCGCCGGAG
GTGGGCGAGG CGACGATCAC CAATAGCACG GCCGACGTCC AGGTCGTGGT CAAGGGCATG
ACGCCGGGCC GCTTCGTCGG CGCGGGTGGC CTGGTCGGGC GCAACACCGG CCTGATCGCC
GGGTCGTCGA GCGCCGGTTC CGTCCAGGTG GACGGCGAAG GTGCCGTGGT CGGCGGCCTC
GTCGGTATCA ACGACGTCAA CGGCAAGACC CGCGGCACGA TCCGTGCATC GAACTCGTCC
AGCGAGGTCA AGGCGGCCGG CAACGCGAAG GCGGGCGGTC TGGTCGGCGT CAACAAGGCG
CTCGTCGACG CGTCGTCGGC GAGCGGTGCG GTGACGGCCG GCGCCAACAG CCGCGTGGGC
GGCCTGGTCG GCAGCAACGA CGATGACGTG CTCGCGTCGA AGGCGTCCGG CAAGGTCACG
GCCGGCAACG GCAGCTCGGC CGGCGGCCTG ATCGGCGCCA ATGGCGGGAC GGTCAACGGA
TCCAGCGCGA GCGGTACCGT GACGGTGGTA GGGGCAGGCA ACGCCGGCGG CCTGGTCGGT
TTCAGCTACG GTCGCAACAG CCGCGTATCG GGCTCGAGCG CGACGGGCGA CGTCTTCGCC
GGGTCCGACA GCTCGGTCGG CGGGCTGGTG GGCTTCCTCC AGGACGGCAC GGTCGAATCC
TCGTCGGCCA GCGGTTCGGT GAAGGGCGGC GATCGCAGCT ACATCGGCGG GCTGGTCGGC
ACGAACTACT CCGGCACCGT CAGCGGCTCG TCGTCGTCGA GCACGGTGAG CGGCGGGAGG
TACGCGAAGC TGGGCGGGCT GGTCGGCTTG AACGGGGGCT GGGTGCTGGA TTCCACTACG
TCGAGCAAGA TCGTCACCAC GCCGGGCTAC CTTCAGACGT TCGGCGCGCT TGCCGGCGGT
AATTCCGGCG TCCTGAAGGG AAACAGTGCA ACCGGCGATG CGGCCGGCGT GAAGCCGGTC
GGGATCGCGT ATCGCTGA
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| Protein sequence | MNNAYSLVWN DVQGGWTVAG ETARRRGKRS GGKRAIAVAA SLLGLVATGA HALPTGGAIV
GGKGDIATSS DGKAMSVNQH TDKLITNWQD FSIAGGERVS FHQPTDKSIA LNRVIGTNGS
QIQGQLDANG KVFLVNPNGV VFGKGAQVNV GGLVATTRNI SDADFMDGKY RFTGTSKNAV
VNEGTITAAE GGSVALLGAQ VSNSGTIQAK LGRVALAAGN TMTVNFDGNG LLNLQVDDGA
VDAQVSNGGL LKADGGEVLM TARAAGDLLG AVVNNTGTIE AKGLNSRSGK ITLEGDLVKV
AGKLDASGQE ADASGGVVTT RGERVEVAND VQVDTRAPGG RTGTWKIEAA NAGVGLNGNS
SESGSDALGA DTLSRALGTT NVELANTKGN LTVDGSVNWA SDNTLTLTSQ HGDVDLKKSL
DASGENAGLT VNAAKQIRVH DKVTLTGRNA HLELNSGSGH TLTNANAVVT LSGQNASFRA
NGEDYTVIHD LAGLRNVDAN LSGRYVLGNA IKGSGRFRSI GGSNGFGGVF DGFGNTVSGL
TLYNDADADS VGLFGTNWGR IANLKLQGGT VNGVSSYASG QPLFVGSLVG INFGTLSNVA
ARDVLVTGTG SGTTILGGLV GWNLSGQIDR ASVSGRVEGD RSTIKIGGLV GENLTVLPPE
VGEATITNST ADVQVVVKGM TPGRFVGAGG LVGRNTGLIA GSSSAGSVQV DGEGAVVGGL
VGINDVNGKT RGTIRASNSS SEVKAAGNAK AGGLVGVNKA LVDASSASGA VTAGANSRVG
GLVGSNDDDV LASKASGKVT AGNGSSAGGL IGANGGTVNG SSASGTVTVV GAGNAGGLVG
FSYGRNSRVS GSSATGDVFA GSDSSVGGLV GFLQDGTVES SSASGSVKGG DRSYIGGLVG
TNYSGTVSGS SSSSTVSGGR YAKLGGLVGL NGGWVLDSTT SSKIVTTPGY LQTFGALAGG
NSGVLKGNSA TGDAAGVKPV GIAYR
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