| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1222 |
|---|
| Symbol | |
|---|
| ID | 4309953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1333679 |
|---|
| End bp | 1334839 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638149031 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_773114 |
|---|
| Protein GI | 115351275 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.329178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC CGATTCTTCA GTTTGGCACC AGCCGGTTTC TCCAGGCCCA TGTCGCCCTG
TTCGTATCGC AGGCGCTGGA GCGTGGCGAT GCGATCGGCG GGATCCGCAT GGTGCAGACC
ACCGACAATC CGGCAAGCCA TGCGCGCATC GCCGCTTTGG CCCAGTCAGG CAGTTATCCG
GTGAAGATCC GCGGCAGGGA ACACGGCGCG ATCGTGGATA CGGTCGTCCA CTGCCGCGCC
GTGCGCGCCG CGTGGATCGC CGATCGCGAC TGGGCGATGA TCCGGCATGC GGTCACGCAT
GACGTCCGCG TGATTGTGTC GAACACGGGC GACGCCGGCT ACCGTCTCGA CGAGCGCGAT
TCGCCGGCGC TGCTCGCGCT GGAGAGTCAC GTCCCGCGCA GCTTCCCCGC CAAGCTGCTC
ACGCTGCTGC ATGCACGATG GCGCGCACGG CCCGGTGCGG GCGTGTCGAT CTTTCCGTGC
GAACTCGTCG CGCGCAACGG CGACACGCTG CGCACGCTGG TCATCGGCCT CGCTGAACAA
TGGGCGCTGC CCGCGCCCTT CGTCACGTAC CTGTCGCAAC GATGCATCTG GGTCAACTCG
CTGGTCGACC GGATCGTGTC CGAACCGATC GAACCGGTGG GCGCCGTGGC CGAGCCCTAC
GCGCTCTGGG CCATCGAACG ACAACCGGGC ATGGAACTGC CGTGCACGCA CGAACATATC
GTCGTGACCG ACGACCTGCT CAGCCACGAG CGGCTCAAGC TGTTCTTTCT GAACGTCGGG
CATACCTGGC TTGCCGACCA GTGGCTCGTG CAGCGCCGCA GCAGCGCGCA GACCGTGTTC
GACGCGATGA ACGATACGAC GCTGCGCGAG GGCATCGAGG GCGTCTGGGG CGAGGAAGTC
CTGCCCGTGT TCGATGCGCT CGGGATGCGC GTTCGCGCTG AGCAATACGT TGCAAGCGTG
CGCGAACGGT TTCTTAATCC GTATCTGAAC CATCACATCG CGGACATTGC CGGCAACCAT
GTCGAAAAGG TCCGGCGGCG GATTCTGCCG CTGATCGAAC TGGCCGATTC GCTCGGGGTC
GCGCCTGATC AGACGCGGCT GCGCGATACG CTCGCGCGGC ATGGCGTGAC ACCCTCAACC
AAAGAGGCAA ATGCATCATG A
|
|---|
| Protein sequence | MSEPILQFGT SRFLQAHVAL FVSQALERGD AIGGIRMVQT TDNPASHARI AALAQSGSYP
VKIRGREHGA IVDTVVHCRA VRAAWIADRD WAMIRHAVTH DVRVIVSNTG DAGYRLDERD
SPALLALESH VPRSFPAKLL TLLHARWRAR PGAGVSIFPC ELVARNGDTL RTLVIGLAEQ
WALPAPFVTY LSQRCIWVNS LVDRIVSEPI EPVGAVAEPY ALWAIERQPG MELPCTHEHI
VVTDDLLSHE RLKLFFLNVG HTWLADQWLV QRRSSAQTVF DAMNDTTLRE GIEGVWGEEV
LPVFDALGMR VRAEQYVASV RERFLNPYLN HHIADIAGNH VEKVRRRILP LIELADSLGV
APDQTRLRDT LARHGVTPST KEANAS
|
|---|
| |