Gene Bamb_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1202 
Symbol 
ID4309933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1317095 
End bp1317787 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID638149010 
Productpeptidase M23B 
Protein accessionYP_773094 
Protein GI115351255 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGAA CAACAACGAA GCGACTCGTC GCGGCCGCCT GCGCCGCGCT GCTCGTCGCG 
TGCGGCTCCG CGCCCGTCGG CCCGGGTTAC TACCGCGTCG AGCGCGGCGA CACGCTCTAC 
AAGATCGCGC GCGCGAATCG CACGTCGATG GCGAACATCG TGCGCTGGAA CCAGATCACG 
AACCCCGATG CGATCGAGGT CGGCCAGGTG TTGCGCGTCG CGCCGCCGCC CGGCACCACG 
ACCGCGTCGA CCACTGGCAC CGGCAGCGCG GGACGCAGTC GCCCCGCGCC TTCCGCGCCG 
GTCGAATCGG CCGTCAAGCC GGCCAGCAGC ATCGCGCTGA TCTGGCCGGC CGCCGGCAAC 
GTGGTGCGCA CGTTCGACGG TTCGAAATCC AAGGGCATCG ATATCGCGAA CGCCGCAGGC 
TCACCGGTGC TGGCTGCCGC GCCGGGCACG GTCGTCTATG CGGGGAACGG ATTGCGCGGC 
TACGGCAACC TGATCATCCT CAAGCACAAC GCCGATTACC TGACGGCGTA CGCACACAAC 
CGTGCGCTGC TCGTGAAGGA AGGTCAGTCG GTCACGCAGG GGCAGACGAT CGCGGAGATG 
GGCAACAGCG ACAGCGATCG CGTCGCGCTG CATTTCGAGC TGCGTTACGG CGGCCGCTCG 
ATCGATCCGG CACGCTACCT GCCGGCGCGC TGA
 
Protein sequence
MFGTTTKRLV AAACAALLVA CGSAPVGPGY YRVERGDTLY KIARANRTSM ANIVRWNQIT 
NPDAIEVGQV LRVAPPPGTT TASTTGTGSA GRSRPAPSAP VESAVKPASS IALIWPAAGN 
VVRTFDGSKS KGIDIANAAG SPVLAAAPGT VVYAGNGLRG YGNLIILKHN ADYLTAYAHN 
RALLVKEGQS VTQGQTIAEM GNSDSDRVAL HFELRYGGRS IDPARYLPAR