| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1097 |
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| Symbol | |
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| ID | 4309672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1199767 |
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| End bp | 1203105 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638148905 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_772990 |
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| Protein GI | 115351151 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.145118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATC TCTTTTATTC GAACCGTCAC GAAACGCTCG CCGACGCACT GCTCGACGAC
CTCGCCGCGT TCCCGGCCCG CAACGGCCCG TGGGCGCCGC AGCAGGTCAT CGTGCCGAGC
GCGGCGCTGC GCCGCCGGCT CGAGCTCGAC ATCGCCGCGC GCCACGGCGT GTGCGCGAAC
GTCGAGTTCA CGTATCTCGC GCAATGGCTG TGGGCGCAGA TCGGCCGCGT GCTGACGGTG
CCCGCGCGTT CGCCGTTCGC ACCCGACCGC CTCGTGTGGC GCTGCTACCG GTTGTTCGCG
CAGGCCGCGG GCGATGCGCC GTGGCTCGCG TCGCCGCGGC TGGCCGCGTA TCTGTCCGCG
TCCGACGACG CGATGCGCTA CGAGCTGGCG CAGCGCGTCG CGGCCGTGCT CGATCATTAC
CTGACCTATC GGCCCGAATG GCTGGCCGCG TGGCAGGCCG GCGAGTCGGT GCTCGCGGGC
GACGCCGCGC CGCGCGGGAT CAGCGATGCC GCACGCGACG ACGAGCACTG GCAGGCCGCG
CTGTGGCGCG CGCTGCTCGC CGAGCTGAGC GACAGCGGCA CGCCGCCCGC GCATCGGTTC
CTCGTGGAGG CGCGCAACCT CGATGCCGAA ACCGTCGCGC GCGCCGACTG GCCGGAATCG
GTCAGCGTCT TCGCGCTGCC GACGATGCCG CCGCTGCACG TCGCGCTACT GCGCGAGCTG
TCGCGCTGGA TCGACGTGCG CGTCTATGCG CTCAACCCGT GCCGCGAATT CTGGTTCGAC
ATCGTCACCG CCGCGCATGC CGAGGCGCTC GATGCGGCCG GCCGGCTCGA CTACCAGCAA
GTCGGCCATC CGTTGCTCGC GGAGTGGGGC CGGCAGACGC AGGCGCAACT GCACATGCTG
CACGAACTGA CCGAAAGCGC CGCGTTGGGC GACGCGTCGC ACTTCGTCGG CAATCCCGCG
CCGACCTGGC TCGCGCGCGT GCAGAACGCG ATCCTCGACC TGCAGCCGGA AGCCGAACTC
GGCGAAGCGC CGGCCGAGCG CGGGATCGAG GTGCACGTGT GCCACAGTCT CGCGCGTCAG
CTCGAGGTGC TGCATGACCG CCTGCTCGCG TGGTTCGACG CCGACGCGAC GCTGCAGCCG
TCCGATGTGC TGGTGGCGGT CGCCGATCTC GCGGCGGCGG GGCCGCTGAT CGATGCGGTG
TTCGGCACGG CGGGCGCCGG CGGCGCGCGC GTGCCTTACC GGATCACCGG CCTGCCGCCG
TCGCAGGCGA ACCCGGTCGC GCGCGTGCTG CTCGAATGGC TCGCGTTGCC GGAGCGGCAG
GTCGGCGCGC CGGAGCTGGT CGAATGGCTG CGCGTCGACG CGGTCGCGGC CCGTTACGGC
ATCGACGCCG CCGCGCTCGA GACGGTGCAG ACCTGGCTCG CGGCCGCCGG CGCGCGGCGC
GGGCTGTCGC CGACGGCGAG CGACGATGCG GCGGTGCCGG CGCCGCGCCA TACGTTCTCC
GATGCGCTCG CGCGGCTCTT CCTCGGCTAT GCGATGCCCG AAGGCGCGGC ACCCGTCGGC
GCGTGGCTGC CGATCGAGGC GGCCACCGGC AGCGAGGCCG AACTGCTCGG CCGGCTCGCG
CGCTTTACCG ACGATCTCGA CGGCTTTTCA CGGCGGCTCG CCAGCGCGCA TACGCCGCGC
GCATGGAGCG AACTGTTCGC CGACACCCTC GCGCGGTTCT TCGACTCCGG CGCCGCGTAT
GCCGATGCGC TCGCAGGTGT GCGCGACGCG CTCGACGCGA TGCTCGCCGC GATGACGGAA
GGCGCGCCCG ACGAGGCGTT GCCCGCGGCC GTCGTGCGCG CGGGGCTGAC GGCCGCGCTC
GACGATCCGG CGCGCGGCGG GGTGCCGTGG GGCGGTGTCA CGTTCTCGTC GCTGACGAGC
TTGCGCGGCT TGCCGTACCG CGTCGTGTGC CTGCTCGGCA TGGACGACGG CGTGCTGCCG
AGCCTCGCGC GCGCGGACGA GTTCGACCTG ATGGCCGTCC TGCCGAAGCT CGGCGACCGC
CAGCGCCGCG ACGACGAGCG CAACCTGTTT CTCGACCTGC TGCTCGCCGC GCGCGACCGG
CTGCTGATCG CCTATACGGG GCGAAGCATT CGCGACAACG CGCCGTTGCC GCCCGCGGCG
CTCGTCGACG AACTGCTCGA CCATCTCGCG CTCGTCACGG CCGGCGCGGA CACCGCGCCG
GGCGCGGTCG ATGCCGCGCG GCGCGCGTTC ATCGTCGAGC ATCCGCTGCA ACCGTTCGCG
GCCGAGTATT TCCGGCCCGG CAGCGAACTG GCGTCGTACG ACGCCGAGCG CGCGACGCTC
GCGTCGCTGC TGGCGGCCGA AGCCGCGCGC GACGCGACGC GCGAGCAGCC GTTCTTCGCG
CAGCCGCTGC CGGCCGAGCT GGTCGAGCCC GTTGCATTCA ACGAATTCGA ACGTTTCTGG
CGGCATCCGG CGCGCGCGCT GCTGCGTGCG CGGCTCGGCA TCGTGTTGTC CGACGCGCAG
GCCGAACTGC TCGACACGGA GCCGTTCGCA CTCGACTTCG CCGGCAGCGA CGCGCTCGCC
GAGCGCGTGC TGCCGCTCCT GATCGAATCG GATGAAGGCG GCGTGCACGA TCATGCGCTG
CGCATCGCGG ACGCCAGCCC CGAACTGCCG GGCGGCGCGA CGGGTGCCGT CTGGCGCGAC
CAGGCGCTCG GCTCGATGAT GCAGCTTGCG TCGAACGTGC GCCGTGCGCT GGCCGACGGC
ATGGAGCGAC GGCCGTTCAC GCTCGCGATC GCGCCCGCAT GGCCCGACAC CGACCAGGCA
CTGTTCGGTG CCGATGACGC GATGCTGTCG GGCGACGCGC TGAGTGCGCC GCTCGAATTG
CACGGCACGC TGAACCGGCT GACGCCGGCG GGCCAGATCA TCTATCGCTA TGCGCGGCCG
AGCGCGCGCG ACTACCTGTC CGCGTGGCTT GCGCACCTCG TCTATTGCGC GGTGGAGCCC
GACGGCCCGC GCCGCACGCT GTGGTTCGGC AGCGGCGGCG CGTTCGAACT CACGCCGGTC
GCTGCACCGC TCGAGCGGCT CGCGCCGCTC GCCGCGCTGT TTCGCGCGGG GCGGCGCATG
CCGCTGCGAT TTTTCCCGCG CAGCGCATGG GCGCGCGTTT CCGACGGCGA GGCGAAGGCC
GCGAGCGTCT GGATCAATGA GCGCGTGGTG AGCGAAGCCG ACGATCCGGC CATCGCGATC
GCGTGGCGCG GCGCCCATCC GTCGCTCGAC GAGCCGTTCG GCACACTTGC GCGGATCGTG
TTCGAGCCGA TGCTGGAACA TCTGAAGGAG ATCGCATGA
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| Protein sequence | MLHLFYSNRH ETLADALLDD LAAFPARNGP WAPQQVIVPS AALRRRLELD IAARHGVCAN
VEFTYLAQWL WAQIGRVLTV PARSPFAPDR LVWRCYRLFA QAAGDAPWLA SPRLAAYLSA
SDDAMRYELA QRVAAVLDHY LTYRPEWLAA WQAGESVLAG DAAPRGISDA ARDDEHWQAA
LWRALLAELS DSGTPPAHRF LVEARNLDAE TVARADWPES VSVFALPTMP PLHVALLREL
SRWIDVRVYA LNPCREFWFD IVTAAHAEAL DAAGRLDYQQ VGHPLLAEWG RQTQAQLHML
HELTESAALG DASHFVGNPA PTWLARVQNA ILDLQPEAEL GEAPAERGIE VHVCHSLARQ
LEVLHDRLLA WFDADATLQP SDVLVAVADL AAAGPLIDAV FGTAGAGGAR VPYRITGLPP
SQANPVARVL LEWLALPERQ VGAPELVEWL RVDAVAARYG IDAAALETVQ TWLAAAGARR
GLSPTASDDA AVPAPRHTFS DALARLFLGY AMPEGAAPVG AWLPIEAATG SEAELLGRLA
RFTDDLDGFS RRLASAHTPR AWSELFADTL ARFFDSGAAY ADALAGVRDA LDAMLAAMTE
GAPDEALPAA VVRAGLTAAL DDPARGGVPW GGVTFSSLTS LRGLPYRVVC LLGMDDGVLP
SLARADEFDL MAVLPKLGDR QRRDDERNLF LDLLLAARDR LLIAYTGRSI RDNAPLPPAA
LVDELLDHLA LVTAGADTAP GAVDAARRAF IVEHPLQPFA AEYFRPGSEL ASYDAERATL
ASLLAAEAAR DATREQPFFA QPLPAELVEP VAFNEFERFW RHPARALLRA RLGIVLSDAQ
AELLDTEPFA LDFAGSDALA ERVLPLLIES DEGGVHDHAL RIADASPELP GGATGAVWRD
QALGSMMQLA SNVRRALADG MERRPFTLAI APAWPDTDQA LFGADDAMLS GDALSAPLEL
HGTLNRLTPA GQIIYRYARP SARDYLSAWL AHLVYCAVEP DGPRRTLWFG SGGAFELTPV
AAPLERLAPL AALFRAGRRM PLRFFPRSAW ARVSDGEAKA ASVWINERVV SEADDPAIAI
AWRGAHPSLD EPFGTLARIV FEPMLEHLKE IA
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